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Alm Laboratory

Alm Laboratory at MIT

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  1. angst angst Public

    Analyzer of Gene and Species Trees

    Python 10 5

  2. SmileTrain SmileTrain Public

    a 16s pipeline

    Python 6 6

  3. GMbC_HGTs GMbC_HGTs Public

    Scripts and data resources from the HGT analysis of GMbC isolate genomes

    5 1

  4. BIO-ML BIO-ML Public

    Command lines for the BIO-ML resources

    4 6

  5. adaptml adaptml Public

    Automatically partition a phylogeny according to genetic and ecological data

    Python 3 1

  6. info info Public

    Lab info, useful resources, and other common goods

    Jupyter Notebook 2 4

Repositories

Showing 10 of 17 repositories
  • www Public

    website

    almlab/www’s past year of commit activity
    Python 0 4 0 0 Updated Feb 9, 2023
  • GMbC_HGTs Public

    Scripts and data resources from the HGT analysis of GMbC isolate genomes

    almlab/GMbC_HGTs’s past year of commit activity
    5 1 0 0 Updated Jan 23, 2021
  • dbotu3 Public Forked from swo/dbotu3

    Distribution-based OTU calling

    almlab/dbotu3’s past year of commit activity
    Python 1 4 0 0 Updated Oct 10, 2019
  • BIO-ML Public

    Command lines for the BIO-ML resources

    almlab/BIO-ML’s past year of commit activity
    4 6 0 0 Updated Jul 13, 2019
  • info Public

    Lab info, useful resources, and other common goods

    almlab/info’s past year of commit activity
    Jupyter Notebook 2 4 0 0 Updated Nov 19, 2018
  • analysis-salt-responsive Public

    Analysis of 16S sequencing data for paper "Salt-responsive gut commensal modulates TH17 axis and disease"

    almlab/analysis-salt-responsive’s past year of commit activity
    Python 0 3 0 0 Updated Sep 8, 2017
  • cmit_Pipeline_MG Public

    Pipeline to process metagenomic sequencing data.

    almlab/cmit_Pipeline_MG’s past year of commit activity
    Python 0 3 0 0 Updated Aug 26, 2017
  • SmileTrain Public

    a 16s pipeline

    almlab/SmileTrain’s past year of commit activity
    Python 6 MIT 6 16 1 Updated Mar 21, 2017
  • angst Public

    Analyzer of Gene and Species Trees

    almlab/angst’s past year of commit activity
    Python 10 5 3 0 Updated Aug 8, 2016
  • adaptml Public

    Automatically partition a phylogeny according to genetic and ecological data

    almlab/adaptml’s past year of commit activity
    Python 3 1 5 0 Updated Jun 12, 2016
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