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Datasets
Datasets
 
 
Inputs
Inputs
 
 
.gitignore
.gitignore
 
 
Analysis.txt
Analysis.txt
 
 
Analysis_Pipeline.do
Analysis_Pipeline.do
 
 
Analysis_Pipeline2.do
Analysis_Pipeline2.do
 
 
Analysis_Pipeline3.do
Analysis_Pipeline3.do
 
 
Master.do
Master.do
 
 
Master_16_oct
Master_16_oct
 
 
Master_aug2016.do
Master_aug2016.do
 
 
Master_oct2016
Master_oct2016
 
 
Master_oct2016.do
Master_oct2016.do
 
 
Master_sept2016
Master_sept2016
 
 
Master_sept2016.do
Master_sept2016.do
 
 
Mykrobe_prob.do
Mykrobe_prob.do
 
 
Pipeline_27_07_2016.7z
Pipeline_27_07_2016.7z
 
 
README.md
README.md
 
 
allfiles
allfiles
 
 
analysis1.log
analysis1.log
 
 
analysis2.log
analysis2.log
 
 
analysis3.log
analysis3.log
 
 
clean.log
clean.log
 
 
clean2.log
clean2.log
 
 
clean_maindata.log
clean_maindata.log
 
 
clean_patch.log
clean_patch.log
 
 
clean_pheno.do
clean_pheno.do
 
 
clean_predict.do
clean_predict.do
 
 
clean_predict16.do
clean_predict16.do
 
 
clean_predict_table2
clean_predict_table2
 
 
clean_predictaug16.do
clean_predictaug16.do
 
 
clean_predictoct16
clean_predictoct16
 
 
create_predict_anti.do
create_predict_anti.do
 
 
create_predict_viru.do
create_predict_viru.do
 
 
inputs.do
inputs.do
 
 
inputs.log
inputs.log
 
 
inputs016.do
inputs016.do
 
 
inputs_16_oct
inputs_16_oct
 
 
inputs_aug2016.do
inputs_aug2016.do
 
 
inputs_no_threshold
inputs_no_threshold
 
 
inputs_no_threshold.do
inputs_no_threshold.do
 
 
inputs_oct016.do
inputs_oct016.do
 
 
mykrobe_prob.log
mykrobe_prob.log
 
 
panal_anti.log
panal_anti.log
 
 
panal_viru.log
panal_viru.log
 
 
session
session
 
 
site.do
site.do
 
 
site.log
site.log
 
 
site_discrepencies.txt
site_discrepencies.txt
 
 
update_combo_method_sens.do
update_combo_method_sens.do
 
 

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Pipeline_27_07_2016

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