version updated prior to 1.4.3 release #270
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| name: C/C++ CI | |
| on: | |
| push: | |
| branches: [ master ] | |
| pull_request: | |
| branches: [ master ] | |
| jobs: | |
| build-linux: | |
| runs-on: ${{ matrix.os }} | |
| strategy: | |
| matrix: | |
| os: [ubuntu-20.04] | |
| steps: | |
| - uses: actions/checkout@master | |
| - name: download htslib | |
| run: | | |
| wget https://github.com/samtools/htslib/archive/1.10.2.tar.gz | |
| sudo apt-get install gcc-7 | |
| - name: untar | |
| run: tar xf 1.10.2.tar.gz | |
| - name: install htslib | |
| env: | |
| CC: gcc-7 | |
| run: | | |
| cd htslib-1.10.2/ | |
| autoheader | |
| autoconf | |
| ./configure | |
| make | |
| sudo make install | |
| sudo ldconfig | |
| - name: autotools | |
| env: | |
| CC: gcc-7 | |
| run: ./autogen.sh | |
| - name: configure | |
| env: | |
| CC: gcc-7 | |
| run: ./configure | |
| - name: make | |
| env: | |
| CC: gcc-7 | |
| run: make | |
| - name: make check | |
| env: | |
| CC: gcc-7 | |
| run: make check | |
| - name: make install | |
| env: | |
| CC: gcc-7 | |
| run: sudo make install | |
| build-macos: | |
| runs-on: [ macos-latest ] | |
| steps: | |
| - uses: actions/checkout@master | |
| - name: install GNU autotools | |
| run: | | |
| curl -O http://ftp.gnu.org/gnu/autoconf/autoconf-2.69.tar.gz | |
| tar zxvf autoconf-2.69.tar.gz | |
| cd autoconf-2.69 | |
| ./configure && make && sudo make install | |
| brew install automake libtool | |
| - name: download htslib | |
| run: wget https://github.com/samtools/htslib/archive/1.10.2.tar.gz | |
| - name: untar | |
| run: tar xf 1.10.2.tar.gz | |
| - name: install htslib | |
| run: | | |
| cd htslib-1.10.2/ | |
| curl -O http://git.savannah.gnu.org/cgit/config.git/plain/config.sub | |
| curl -O http://git.savannah.gnu.org/cgit/config.git/plain/config.guess | |
| chmod +x config.guess config.sub | |
| autoheader | |
| autoconf | |
| ./configure --build=aarch64-apple-darwin --host=aarch64-apple-darwin | |
| make | |
| sudo make install | |
| - name: autoconf | |
| run: ./autogen.sh | |
| - name: configure | |
| run: ./configure | |
| - name: make | |
| run: make | |
| - name: make check | |
| run: make check | |
| - name: make install | |
| run: sudo make install |