Merge pull request #24 from andthum/dependabot/github_actions/actions… #52
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| # Test Code. | |
| # | |
| # See: | |
| # https://docs.github.com/en/actions/guides/building-and-testing-python | |
| name: "Tests" | |
| on: | |
| push: | |
| branches: | |
| - "**" | |
| paths: | |
| - ".github/**" | |
| - "**.py" | |
| - "**.rst" | |
| - "docs/**" | |
| - ".flake8" | |
| - "pyproject.toml" | |
| - "**requirements*.txt" | |
| tags: | |
| - "v[0-9]*" | |
| release: | |
| jobs: | |
| test: | |
| strategy: | |
| matrix: | |
| # Tests must be run on all target platforms and Python versions | |
| os: | |
| - "ubuntu-latest" | |
| - "macos-latest" | |
| - "windows-latest" | |
| python-version: | |
| - "3.7" | |
| - "3.8" | |
| - "3.9" | |
| # Do not cancel in-progress jobs if any matrix job fails | |
| fail-fast: false | |
| runs-on: "${{ matrix.os }}" | |
| steps: | |
| - name: "Checkout repository" | |
| uses: "actions/checkout@v4" | |
| - name: "Set up Python ${{ matrix.python-version }}" | |
| uses: "actions/setup-python@v5" | |
| with: | |
| python-version: "${{ matrix.python-version }}" | |
| - name: "Add directories where pip installs scripts to PATH" | |
| run: | | |
| echo "${HOME}/.local/bin" >> ${GITHUB_PATH} | |
| # Installation path on MacOS for Python >=3.11. | |
| echo "/Users/runner/Library/Python/${{ matrix.python-version }}/bin" >> ${GITHUB_PATH} | |
| - name: "Get pip cache dir" | |
| # pip's cache path depends on the operating system. See | |
| # https://github.com/actions/cache/blob/main/examples.md#python---pip | |
| # This requires pip >=20.1. | |
| id: "pip-cache" | |
| run: | | |
| python -m pip install --user --upgrade pip | |
| echo "dir=$(pip cache dir)" >> ${GITHUB_OUTPUT} | |
| - name: "Create/Restore cache" | |
| uses: "actions/cache@v3" | |
| with: | |
| path: | | |
| ${{ steps.pip-cache.outputs.dir }}/** | |
| ./docs/build/** | |
| key: | | |
| ${{ runner.os }}-${{ matrix.python-version }}-${{ github.job }} | |
| restore-keys: | | |
| ${{ runner.os }}-${{ matrix.python-version }} | |
| ${{ runner.os }} | |
| - name: "Install/Upgrade setuptools and wheel" | |
| # MDAnalysis requires NumPy (>=1.19.2) for setup (see also | |
| # https://github.com/MDAnalysis/mdanalysis/issues/3374#issuecomment-889189979). | |
| # MDAnalysis <3.0 requires Cython <3.0 (see | |
| # https://github.com/MDAnalysis/mdanalysis/pull/4129 and | |
| # https://github.com/cython/cython/issues/3690). | |
| # Without `python-dev-tools` the installation of MDAnalysis | |
| # fails on MacOS-latest with Python 3.9 while building the wheel | |
| # for MDAnalysis. Strangely, the MDAnalysis wheel is only build | |
| # on this OS-Python combination, whereas other OS-Python | |
| # combinations fetch a pre-build wheel. | |
| run: | | |
| python -m pip install --user --upgrade setuptools wheel | |
| python -m pip install --user --upgrade python-dev-tools | |
| python -m pip install --user "Cython <3.0" | |
| python -m pip install --user "numpy >=1.19.2" | |
| - name: "Test installation of this project" | |
| run: | | |
| python -m pip install --user . | |
| # The install only installs the required dependencies. This | |
| # project contains no python module that can be imported. | |
| # python -c "import transfer_Li" |