SPARK-1772 Stop catching Throwable, let Executors die

The main issue this patch fixes is [SPARK-1772](https://issues.apache.org/jira/browse/SPARK-1772), in which Executors may not die when fatal exceptions (e.g., OOM) are thrown. This patch causes Executors to delegate to the ExecutorUncaughtExceptionHandler when a fatal exception is thrown.

This patch also continues the fight in the neverending war against `case t: Throwable =>`, by only catching Exceptions in many places, and adding a wrapper for Threads and Runnables to make sure any uncaught exceptions are at least printed to the logs.

It also turns out that it is unlikely that the IndestructibleActorSystem actually works, given testing ([here](https://gist.github.com/aarondav/ca1f0cdcd50727f89c0d)). The uncaughtExceptionHandler is not called from the places that we expected it would be.
[SPARK-1620](https://issues.apache.org/jira/browse/SPARK-1620) deals with part of this issue, but refactoring our Actor Systems to ensure that exceptions are dealt with properly is a much bigger change, outside the scope of this PR.

Author: Aaron Davidson <aaron@databricks.com>

Closes #715 from aarondav/throwable and squashes the following commits:

f9b9bfe [Aaron Davidson] Remove other redundant 'throw e'
e937a0a [Aaron Davidson] Address Prashant and Matei's comments
1867867 [Aaron Davidson] [RFC] SPARK-1772 Stop catching Throwable, let Executors die

core/src/main/scala/org/apache/spark/ContextCleaner.scala

@@ -23,6 +23,7 @@ import scala.collection.mutable.{ArrayBuffer, SynchronizedBuffer}
 
 import org.apache.spark.broadcast.Broadcast
 import org.apache.spark.rdd.RDD
+import org.apache.spark.util.Utils
 
 /**
  * Classes that represent cleaning tasks.
@@ -110,7 +111,7 @@ private[spark] class ContextCleaner(sc: SparkContext) extends Logging {
   }
 
   /** Keep cleaning RDD, shuffle, and broadcast state. */
-  private def keepCleaning() {
+  private def keepCleaning(): Unit = Utils.logUncaughtExceptions {
     while (!stopped) {
       try {
         val reference = Option(referenceQueue.remove(ContextCleaner.REF_QUEUE_POLL_TIMEOUT))
@@ -128,7 +129,7 @@ private[spark] class ContextCleaner(sc: SparkContext) extends Logging {
           }
         }
       } catch {
-        case t: Throwable => logError("Error in cleaning thread", t)
+        case e: Exception => logError("Error in cleaning thread", e)
       }
     }
   }
@@ -141,7 +142,7 @@ private[spark] class ContextCleaner(sc: SparkContext) extends Logging {
       listeners.foreach(_.rddCleaned(rddId))
       logInfo("Cleaned RDD " + rddId)
     } catch {
-      case t: Throwable => logError("Error cleaning RDD " + rddId, t)
+      case e: Exception => logError("Error cleaning RDD " + rddId, e)
     }
   }
 
@@ -154,7 +155,7 @@ private[spark] class ContextCleaner(sc: SparkContext) extends Logging {
       listeners.foreach(_.shuffleCleaned(shuffleId))
       logInfo("Cleaned shuffle " + shuffleId)
     } catch {
-      case t: Throwable => logError("Error cleaning shuffle " + shuffleId, t)
+      case e: Exception => logError("Error cleaning shuffle " + shuffleId, e)
     }
   }
 
@@ -166,7 +167,7 @@ private[spark] class ContextCleaner(sc: SparkContext) extends Logging {
       listeners.foreach(_.broadcastCleaned(broadcastId))
       logInfo("Cleaned broadcast " + broadcastId)
     } catch {
-      case t: Throwable => logError("Error cleaning broadcast " + broadcastId, t)
+      case e: Exception => logError("Error cleaning broadcast " + broadcastId, e)
     }
   }
 

core/src/main/scala/org/apache/spark/SparkContext.scala

@@ -1494,8 +1494,8 @@ object SparkContext extends Logging {
         } catch {
           // TODO: Enumerate the exact reasons why it can fail
           // But irrespective of it, it means we cannot proceed !
-          case th: Throwable => {
-            throw new SparkException("YARN mode not available ?", th)
+          case e: Exception => {
+            throw new SparkException("YARN mode not available ?", e)
           }
         }
         val backend = new CoarseGrainedSchedulerBackend(scheduler, sc.env.actorSystem)
@@ -1510,8 +1510,8 @@ object SparkContext extends Logging {
           cons.newInstance(sc).asInstanceOf[TaskSchedulerImpl]
 
         } catch {
-          case th: Throwable => {
-            throw new SparkException("YARN mode not available ?", th)
+          case e: Exception => {
+            throw new SparkException("YARN mode not available ?", e)
           }
         }
 
@@ -1521,8 +1521,8 @@ object SparkContext extends Logging {
           val cons = clazz.getConstructor(classOf[TaskSchedulerImpl], classOf[SparkContext])
           cons.newInstance(scheduler, sc).asInstanceOf[CoarseGrainedSchedulerBackend]
         } catch {
-          case th: Throwable => {
-            throw new SparkException("YARN mode not available ?", th)
+          case e: Exception => {
+            throw new SparkException("YARN mode not available ?", e)
           }
         }
 

core/src/main/scala/org/apache/spark/api/python/PythonRDD.scala

@@ -171,7 +171,7 @@ private[spark] class PythonRDD[T: ClassTag](
       this.interrupt()
     }
 
-    override def run() {
+    override def run(): Unit = Utils.logUncaughtExceptions {
       try {
         SparkEnv.set(env)
         val stream = new BufferedOutputStream(worker.getOutputStream, bufferSize)
@@ -282,7 +282,6 @@ private[spark] object PythonRDD {
       }
     } catch {
       case eof: EOFException => {}
-      case e: Throwable => throw e
     }
     JavaRDD.fromRDD(sc.sc.parallelize(objs, parallelism))
   }

core/src/main/scala/org/apache/spark/api/python/PythonWorkerFactory.scala

@@ -71,7 +71,6 @@ private[spark] class PythonWorkerFactory(pythonExec: String, envVars: Map[String
           stopDaemon()
           startDaemon()
           new Socket(daemonHost, daemonPort)
-        case e: Throwable => throw e
       }
     }
   }

core/src/main/scala/org/apache/spark/deploy/Client.scala

@@ -157,7 +157,7 @@ object Client {
     // TODO: See if we can initialize akka so return messages are sent back using the same TCP
     //       flow. Else, this (sadly) requires the DriverClient be routable from the Master.
     val (actorSystem, _) = AkkaUtils.createActorSystem(
-      "driverClient", Utils.localHostName(), 0, false, conf, new SecurityManager(conf))
+      "driverClient", Utils.localHostName(), 0, conf, new SecurityManager(conf))
 
     actorSystem.actorOf(Props(classOf[ClientActor], driverArgs, conf))
 

core/src/main/scala/org/apache/spark/deploy/SparkHadoopUtil.scala

@@ -103,7 +103,7 @@ object SparkHadoopUtil {
           .newInstance()
           .asInstanceOf[SparkHadoopUtil]
       } catch {
-       case th: Throwable => throw new SparkException("Unable to load YARN support", th)
+       case e: Exception => throw new SparkException("Unable to load YARN support", e)
       }
     } else {
       new SparkHadoopUtil

core/src/main/scala/org/apache/spark/deploy/history/HistoryServer.scala

@@ -70,7 +70,7 @@ class HistoryServer(
    * TODO: Add a mechanism to update manually.
    */
   private val logCheckingThread = new Thread {
-    override def run() {
+    override def run(): Unit = Utils.logUncaughtExceptions {
       while (!stopped) {
         val now = System.currentTimeMillis
         if (now - lastLogCheckTime > UPDATE_INTERVAL_MS) {
@@ -154,7 +154,7 @@ class HistoryServer(
         numCompletedApplications = logInfos.size
 
       } catch {
-        case t: Throwable => logError("Exception in checking for event log updates", t)
+        case e: Exception => logError("Exception in checking for event log updates", e)
       }
     } else {
       logWarning("Attempted to check for event log updates before binding the server.")
@@ -231,8 +231,8 @@ class HistoryServer(
         dir.getModificationTime
       }
     } catch {
-      case t: Throwable =>
-        logError("Exception in accessing modification time of %s".format(dir.getPath), t)
+      case e: Exception =>
+        logError("Exception in accessing modification time of %s".format(dir.getPath), e)
         -1L
     }
   }

core/src/main/scala/org/apache/spark/deploy/master/Master.scala

@@ -684,8 +684,8 @@ private[spark] class Master(
         webUi.attachSparkUI(ui)
         return true
       } catch {
-        case t: Throwable =>
-          logError("Exception in replaying log for application %s (%s)".format(appName, app.id), t)
+        case e: Exception =>
+          logError("Exception in replaying log for application %s (%s)".format(appName, app.id), e)
       }
     } else {
       logWarning("Application %s (%s) has no valid logs: %s".format(appName, app.id, eventLogDir))

core/src/main/scala/org/apache/spark/deploy/worker/DriverWrapper.scala

@@ -31,7 +31,7 @@ object DriverWrapper {
       case workerUrl :: mainClass :: extraArgs =>
         val conf = new SparkConf()
         val (actorSystem, _) = AkkaUtils.createActorSystem("Driver",
-          Utils.localHostName(), 0, false, conf, new SecurityManager(conf))
+          Utils.localHostName(), 0, conf, new SecurityManager(conf))
         actorSystem.actorOf(Props(classOf[WorkerWatcher], workerUrl), name = "workerWatcher")
 
         // Delegate to supplied main class

core/src/main/scala/org/apache/spark/executor/CoarseGrainedExecutorBackend.scala

@@ -105,7 +105,7 @@ private[spark] object CoarseGrainedExecutorBackend {
         // Create a new ActorSystem to run the backend, because we can't create a
         // SparkEnv / Executor before getting started with all our system properties, etc
         val (actorSystem, boundPort) = AkkaUtils.createActorSystem("sparkExecutor", hostname, 0,
-          indestructible = true, conf = conf, new SecurityManager(conf))
+          conf, new SecurityManager(conf))
         // set it
         val sparkHostPort = hostname + ":" + boundPort
         actorSystem.actorOf(

core/src/main/scala/org/apache/spark/executor/Executor.scala

@@ -74,28 +74,7 @@ private[spark] class Executor(
     // Setup an uncaught exception handler for non-local mode.
     // Make any thread terminations due to uncaught exceptions kill the entire
     // executor process to avoid surprising stalls.
-    Thread.setDefaultUncaughtExceptionHandler(
-      new Thread.UncaughtExceptionHandler {
-        override def uncaughtException(thread: Thread, exception: Throwable) {
-          try {
-            logError("Uncaught exception in thread " + thread, exception)
-
-            // We may have been called from a shutdown hook. If so, we must not call System.exit().
-            // (If we do, we will deadlock.)
-            if (!Utils.inShutdown()) {
-              if (exception.isInstanceOf[OutOfMemoryError]) {
-                System.exit(ExecutorExitCode.OOM)
-              } else {
-                System.exit(ExecutorExitCode.UNCAUGHT_EXCEPTION)
-              }
-            }
-          } catch {
-            case oom: OutOfMemoryError => Runtime.getRuntime.halt(ExecutorExitCode.OOM)
-            case t: Throwable => Runtime.getRuntime.halt(ExecutorExitCode.UNCAUGHT_EXCEPTION_TWICE)
-          }
-        }
-      }
-    )
+    Thread.setDefaultUncaughtExceptionHandler(ExecutorUncaughtExceptionHandler)
   }
 
   val executorSource = new ExecutorSource(this, executorId)
@@ -259,6 +238,11 @@ private[spark] class Executor(
         }
 
         case t: Throwable => {
+          // Attempt to exit cleanly by informing the driver of our failure.
+          // If anything goes wrong (or this was a fatal exception), we will delegate to
+          // the default uncaught exception handler, which will terminate the Executor.
+          logError("Exception in task ID " + taskId, t)
+
           val serviceTime = System.currentTimeMillis() - taskStart
           val metrics = attemptedTask.flatMap(t => t.metrics)
           for (m <- metrics) {
@@ -268,10 +252,11 @@ private[spark] class Executor(
           val reason = ExceptionFailure(t.getClass.getName, t.toString, t.getStackTrace, metrics)
           execBackend.statusUpdate(taskId, TaskState.FAILED, ser.serialize(reason))
 
-          // TODO: Should we exit the whole executor here? On the one hand, the failed task may
-          // have left some weird state around depending on when the exception was thrown, but on
-          // the other hand, maybe we could detect that when future tasks fail and exit then.
-          logError("Exception in task ID " + taskId, t)
+          // Don't forcibly exit unless the exception was inherently fatal, to avoid
+          // stopping other tasks unnecessarily.
+          if (Utils.isFatalError(t)) {
+            ExecutorUncaughtExceptionHandler.uncaughtException(t)
+          }
         }
       } finally {
         // TODO: Unregister shuffle memory only for ResultTask

core/src/main/scala/org/apache/spark/executor/ExecutorUncaughtExceptionHandler.scala

@@ -0,0 +1,53 @@
+/*
+ * Licensed to the Apache Software Foundation (ASF) under one or more
+ * contributor license agreements.  See the NOTICE file distributed with
+ * this work for additional information regarding copyright ownership.
+ * The ASF licenses this file to You under the Apache License, Version 2.0
+ * (the "License"); you may not use this file except in compliance with
+ * the License.  You may obtain a copy of the License at
+ *
+ *    http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
+
+package org.apache.spark.executor
+
+import org.apache.spark.Logging
+import org.apache.spark.util.Utils
+
+/**
+ * The default uncaught exception handler for Executors terminates the whole process, to avoid
+ * getting into a bad state indefinitely. Since Executors are relatively lightweight, it's better
+ * to fail fast when things go wrong.
+ */
+private[spark] object ExecutorUncaughtExceptionHandler
+  extends Thread.UncaughtExceptionHandler with Logging {
+
+  override def uncaughtException(thread: Thread, exception: Throwable) {
+    try {
+      logError("Uncaught exception in thread " + thread, exception)
+
+      // We may have been called from a shutdown hook. If so, we must not call System.exit().
+      // (If we do, we will deadlock.)
+      if (!Utils.inShutdown()) {
+        if (exception.isInstanceOf[OutOfMemoryError]) {
+          System.exit(ExecutorExitCode.OOM)
+        } else {
+          System.exit(ExecutorExitCode.UNCAUGHT_EXCEPTION)
+        }
+      }
+    } catch {
+      case oom: OutOfMemoryError => Runtime.getRuntime.halt(ExecutorExitCode.OOM)
+      case t: Throwable => Runtime.getRuntime.halt(ExecutorExitCode.UNCAUGHT_EXCEPTION_TWICE)
+    }
+  }
+
+  def uncaughtException(exception: Throwable) {
+    uncaughtException(Thread.currentThread(), exception)
+  }
+}

core/src/main/scala/org/apache/spark/scheduler/EventLoggingListener.scala

@@ -206,8 +206,8 @@ private[spark] object EventLoggingListener extends Logging {
         applicationComplete = filePaths.exists { path => isApplicationCompleteFile(path.getName) }
       )
     } catch {
-      case t: Throwable =>
-        logError("Exception in parsing logging info from directory %s".format(logDir), t)
+      case e: Exception =>
+        logError("Exception in parsing logging info from directory %s".format(logDir), e)
       EventLoggingInfo.empty
     }
   }

core/src/main/scala/org/apache/spark/scheduler/TaskResultGetter.scala

@@ -43,7 +43,7 @@ private[spark] class TaskResultGetter(sparkEnv: SparkEnv, scheduler: TaskSchedul
   def enqueueSuccessfulTask(
     taskSetManager: TaskSetManager, tid: Long, serializedData: ByteBuffer) {
     getTaskResultExecutor.execute(new Runnable {
-      override def run() {
+      override def run(): Unit = Utils.logUncaughtExceptions {
         try {
           val result = serializer.get().deserialize[TaskResult[_]](serializedData) match {
             case directResult: DirectTaskResult[_] => directResult
@@ -70,7 +70,7 @@ private[spark] class TaskResultGetter(sparkEnv: SparkEnv, scheduler: TaskSchedul
           case cnf: ClassNotFoundException =>
             val loader = Thread.currentThread.getContextClassLoader
             taskSetManager.abort("ClassNotFound with classloader: " + loader)
-          case ex: Throwable =>
+          case ex: Exception =>
             taskSetManager.abort("Exception while deserializing and fetching task: %s".format(ex))
         }
       }
@@ -81,7 +81,7 @@ private[spark] class TaskResultGetter(sparkEnv: SparkEnv, scheduler: TaskSchedul
     serializedData: ByteBuffer) {
     var reason : TaskEndReason = UnknownReason
     getTaskResultExecutor.execute(new Runnable {
-      override def run() {
+      override def run(): Unit = Utils.logUncaughtExceptions {
         try {
           if (serializedData != null && serializedData.limit() > 0) {
             reason = serializer.get().deserialize[TaskEndReason](
@@ -94,7 +94,7 @@ private[spark] class TaskResultGetter(sparkEnv: SparkEnv, scheduler: TaskSchedul
             val loader = Utils.getContextOrSparkClassLoader
             logError(
               "Could not deserialize TaskEndReason: ClassNotFound with classloader " + loader)
-          case ex: Throwable => {}
+          case ex: Exception => {}
         }
         scheduler.handleFailedTask(taskSetManager, tid, taskState, reason)
       }

core/src/main/scala/org/apache/spark/storage/DiskBlockManager.scala

@@ -148,7 +148,7 @@ private[spark] class DiskBlockManager(shuffleManager: ShuffleBlockManager, rootD
   private def addShutdownHook() {
     localDirs.foreach(localDir => Utils.registerShutdownDeleteDir(localDir))
     Runtime.getRuntime.addShutdownHook(new Thread("delete Spark local dirs") {
-      override def run() {
+      override def run(): Unit = Utils.logUncaughtExceptions {
         logDebug("Shutdown hook called")
         DiskBlockManager.this.stop()
       }
@@ -162,8 +162,8 @@ private[spark] class DiskBlockManager(shuffleManager: ShuffleBlockManager, rootD
         try {
           if (!Utils.hasRootAsShutdownDeleteDir(localDir)) Utils.deleteRecursively(localDir)
         } catch {
-          case t: Throwable =>
-            logError("Exception while deleting local spark dir: " + localDir, t)
+          case e: Exception =>
+            logError("Exception while deleting local spark dir: " + localDir, e)
         }
       }
     }

core/src/main/scala/org/apache/spark/storage/TachyonBlockManager.scala

@@ -25,7 +25,6 @@ import tachyon.client.TachyonFile
 
 import org.apache.spark.Logging
 import org.apache.spark.executor.ExecutorExitCode
-import org.apache.spark.network.netty.ShuffleSender
 import org.apache.spark.util.Utils
 
 
@@ -137,16 +136,16 @@ private[spark] class TachyonBlockManager(
   private def addShutdownHook() {
     tachyonDirs.foreach(tachyonDir => Utils.registerShutdownDeleteDir(tachyonDir))
     Runtime.getRuntime.addShutdownHook(new Thread("delete Spark tachyon dirs") {
-      override def run() {
+      override def run(): Unit = Utils.logUncaughtExceptions {
         logDebug("Shutdown hook called")
         tachyonDirs.foreach { tachyonDir =>
           try {
             if (!Utils.hasRootAsShutdownDeleteDir(tachyonDir)) {
               Utils.deleteRecursively(tachyonDir, client)
             }
           } catch {
-            case t: Throwable =>
-              logError("Exception while deleting tachyon spark dir: " + tachyonDir, t)
+            case e: Exception =>
+              logError("Exception while deleting tachyon spark dir: " + tachyonDir, e)
           }
         }
       }