Fix multiple bugs in Hera Input and Output classes
#1193
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The current code will silently skip fields with: - a Pydantic annotation but no workflow annotation - a workflow annotation with no name field Fix the code to ignore unrecognized annotations (this is a requirement of the Annotated spec) and to default the model name to the field name if none is given explicitly. Signed-off-by: Alice Purcell <alicederyn@gmail.com>
Signed-off-by: Alice Purcell <alicederyn@gmail.com>
Signed-off-by: Alice Purcell <alicederyn@gmail.com>
Signed-off-by: Alice Purcell <alicederyn@gmail.com>
Signed-off-by: Alice Purcell <alicederyn@gmail.com>
OutputMixin._get_outputs was mutating the original annotation instead of copying it; not defaulting the name to the field name; and not copying the model default into the annotation. Signed-off-by: Alice Purcell <alicederyn@gmail.com>
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Codecov ReportAttention: Patch coverage is
Additional details and impacted files@@ Coverage Diff @@
## main #1193 +/- ##
=======================================
+ Coverage 81.7% 86.0% +4.3%
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Files 54 60 +6
Lines 4208 4038 -170
Branches 889 838 -51
=======================================
+ Hits 3439 3475 +36
+ Misses 574 391 -183
+ Partials 195 172 -23 ☔ View full report in Codecov by Sentry. |
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Multiple methods in _io_mixins resolve the same problem of iterating through all fields, constructing a workflow annotation based on the user's annotations, defaulting the name if unset or falling back to a Parameter if no annotation is found. Factor that logic out into an iterator, simplifying the various methods and reducing the risk of discrepancies and bugs in future. Signed-off-by: Alice Purcell <alicederyn@gmail.com>
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jeongukjae
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Sep 6, 2024
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This also fixes #1165, updated the PR description |
This was referenced Sep 12, 2024
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**Pull Request Checklist** - [x] Fixes #1198 - [ ] ~Tests added~ - [x] Documentation/examples added - [x] [Good commit messages](https://cbea.ms/git-commit/) and/or PR title **Description of PR** From issue description: * [Script basics "explicit" example](https://hera.readthedocs.io/en/stable/user-guides/script-basics/#script-decorator) passes `source=echo` in a Task - this is not possible * [Script annotations](https://hera.readthedocs.io/en/stable/user-guides/script-annotations/) is quite confusing to read. Examples are overly complex/wordy, some being incorrect. We can also show that `name` can be inferred when #1193 is merged * [expr guide](https://hera.readthedocs.io/en/stable/user-guides/expr/)'s first link is dead, also some formatting can be tidied up * README is duplicated due to mascot image link, but we can fix this. Also note the [PyPI page](https://pypi.org/project/hera/) has a broken image  --------- Signed-off-by: Elliot Gunton <elliotgunton@gmail.com>
Signed-off-by: Elliot Gunton <elliotgunton@gmail.com>
Signed-off-by: Elliot Gunton <elliotgunton@gmail.com>
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Input and Output classes
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Pull Request Checklist
Description of PR
Currently, the methods that consume annotations in InputMixin and OutputMixin have multiple bugs:
OutputMixin._get_outputsadditionally was:This PR pulls out a common function to iterate through fields and yield annotations, which:
This ensures all functions treat an explicit Parameter and a missing workflow annotation the same way, solving the second issue with
OutputMixin._get_outputs.