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Added a recalc two epoch metrics method #290

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merged 15 commits into from
Oct 7, 2021
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@ajstewart ajstewart commented Oct 5, 2021

Adds functionality to the pipeline component to recalculate the two epoch metric pairs dataframe.

I have tested it on the development full pipeline run but sometimes it runs out of memory. So if anyone does ever use it they may run into memory issues on Nimbus if the Hub memory per user is not set high enough.

  • Added methods in pipeline.py.
  • Added vs and m calc methods to utils.py.
  • Updated docs.
  • Updated vaex-core version to 4.5.0.
  • Updated pipeline notebook example.
  • Added tests for functions.

- Added methods in pipeline.py.
- Added vs and m calc methods to utils.py.
- Updated docs.
- Updated vaex-core version to 4.5.0.
- Changed methods to allow the return of vaex dataframes.
- Minor doc updates (warnings on memory).
- Notebook example includes recalculating measurement pairs.
@ajstewart ajstewart added documentation Improvements or additions to documentation enhancement New feature or request labels Oct 5, 2021
@ajstewart ajstewart self-assigned this Oct 5, 2021
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vast-bot commented Oct 5, 2021

Hello @ajstewart! Thanks for updating this PR. We checked the lines you've touched for PEP 8 issues, and found:

There are currently no PEP 8 issues detected in this Pull Request. Cheers! 🍻

Comment last updated at 2021-10-07 13:48:36 UTC

[skip ci]
W503 and W504 contradict each other, W503 is the accepted way. Recommended to disable W504.

[skip ci]
@ajstewart ajstewart marked this pull request as ready for review October 5, 2021 18:14
@ajstewart ajstewart requested a review from ddobie October 5, 2021 18:14
ddobie
ddobie previously approved these changes Oct 6, 2021
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Merging with admin privilege as CHANGELOG.md was the only conflict.

@ajstewart ajstewart merged commit ab15910 into dev Oct 7, 2021
@ajstewart ajstewart deleted the add-two-epoch-recalc branch October 7, 2021 13:51
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3 participants