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*beep* *bop* 160 F401 [*] `PySide2.QtCore` imported but unused
139 F405 [ ] `Abundance` may be undefined, or defined from star imports
138 I001 [*] Import block is un-sorted or un-formatted
50 RET505 [ ] Unnecessary `elif` after `return` statement
50 D202 [*] No blank lines allowed after function docstring (found 1)
40 G004 [ ] Logging statement uses f-string
36 UP008 [*] Use `super()` instead of `super(__class__, self)`
28 W605 [*] Invalid escape sequence: `\,`
28 F821 [ ] Undefined name `GET_NEAREST_LINE_REDWARD_FUNCTION`
22 F403 [ ] `from astropy.constants.astropyconst13 import *` used; unable to detect undefined names
20 INP001 [ ] File `.ci-helpers/update_credits.py` is part of an implicit namespace package. Add an `__init__.py`.
19 E712 [*] Avoid equality comparisons to `False`; use `if not ...:` for false checks
19 F811 [ ] Redefinition of unused `OpacityState` from line 14
18 UP004 [*] Class `ConvergencePlots` inherits from `object`
15 B011 [*] Do not `assert False` (`python -O` removes these calls), raise `AssertionError()`
15 PT015 [ ] Assertion always fails, replace with `pytest.fail()`
15 W291 [*] Trailing whitespace
15 UP015 [*] Unnecessary open mode parameters
13 UP031 [*] Use format specifiers instead of percent format
12 D209 [*] Multi-line docstring closing quotes should be on a separate line
11 RET506 [ ] Unnecessary `elif` after `raise` statement
11 E722 [ ] Do not use bare `except`
11 UP032 [*] Use f-string instead of `format` call
9 C408 [*] Unnecessary `dict` call (rewrite as a literal)
9 E402 [ ] Module level import not at top of file
6 UP024 [*] Replace aliased errors with `OSError`
5 ISC003 [ ] Explicitly concatenated string should be implicitly concatenated
5 PIE808 [*] Unnecessary `start` argument in `range`
5 D411 [*] Missing blank line before section ("Parameters")
4 ICN001 [*] `matplotlib` should be imported as `mpl`
4 FLY002 [*] Consider `"\n---\n"` instead of string join
4 D409 [*] Section underline should match the length of its name ("Parameters")
4 D412 [*] No blank lines allowed between a section header and its content ("Parameters")
4 PLR1711 [*] Useless `return` statement at end of function
4 PLW0127 [ ] Self-assignment of variable `atom_data`
4 UP030 [*] Use implicit references for positional format fields
3 EXE001 [ ] Shebang is present but file is not executable
3 FA100 [ ] Add `from __future__ import annotations` to simplify `typing.Tuple`
3 G010 [*] Logging statement uses `warn` instead of `warning`
3 PIE790 [*] Unnecessary `pass` statement
3 RET508 [ ] Unnecessary `elif` after `break` statement
3 PTH117 [ ] `os.path.isabs()` should be replaced by `Path.is_absolute()`
3 F631 [ ] Assert test is a non-empty tuple, which is always `True`
3 PGH004 [ ] Use specific rule codes when using `noqa`
2 ANN205 [ ] Missing return type annotation for staticmethod `get_relative_path`
2 B010 [*] Do not call `setattr` with a constant attribute value. It is not any safer than normal property access.
2 C403 [*] Unnecessary `list` comprehension (rewrite as a `set` comprehension)
2 G001 [ ] Logging statement uses `str.format`
2 PT013 [ ] Incorrect import of `pytest`; use `import pytest` instead
2 N812 [ ] Lowercase `__path__` imported as non-lowercase `TARDIS_PATH`
2 N999 [ ] Invalid module name: 'GXPacket'
2 E713 [*] Test for membership should be `not in`
2 W293 [*] Blank line contains whitespace
1 S113 [ ] Probable use of requests call without timeout
1 S604 [ ] Function call with truthy `shell` parameter identified, security issue
1 S605 [ ] Starting a process with a shell: seems safe, but may be changed in the future; consider rewriting without `shell`
1 B009 [*] Do not call `getattr` with a constant attribute value. It is not any safer than normal property access.
1 B017 [ ] `pytest.raises(Exception)` should be considered evil
1 B018 [ ] Found useless expression. Either assign it to a variable or remove it.
1 B020 [ ] Loop control variable `isotope_dict` overrides iterable it iterates
1 C405 [*] Unnecessary `list` literal (rewrite as a `set` literal)
1 C414 [*] Unnecessary `list` call within `set()`
1 C416 [*] Unnecessary `list` comprehension (rewrite using `list()`)
1 DTZ011 [ ] `datetime.date.today()` used
1 PT014 [*] Duplicate of test case at index 1 in `@pytest_mark.parametrize`
1 PT020 [ ] `@pytest.yield_fixture` is deprecated, use `@pytest.fixture`
1 PT021 [ ] Use `yield` instead of `request.addfinalizer`
1 SIM103 [*] Return the condition directly
1 SIM210 [*] Remove unnecessary `True if ... else False`
1 TD006 [*] Invalid TODO capitalization: `todo` should be `TODO`
1 NPY201 [ ] `np.recfromtxt` will be removed in NumPy 2.0. Use `np.genfromtxt` instead.
1 PERF102 [*] When using only the values of a dict use the `values()` method
1 E401 [*] Multiple imports on one line
1 D106 [ ] Missing docstring in public nested class
1 D406 [*] Section name should end with a newline ("Returns")
1 D407 [*] Missing dashed underline after section ("Returns")
1 PLR0911 [ ] Too many return statements (8 > 6)
1 PLW0406 [ ] Module `tardis.transport.montecarlo.montecarlo_main_loop` imports itself
1 UP009 [*] UTF-8 encoding declaration is unnecessary
1 UP028 [*] Replace `yield` over `for` loop with `yield from`
1 UP034 [*] Avoid extraneous parentheses
1 RUF015 [*] Prefer `next(iter(unique_v))` over single element slice
1 TRY300 [ ] Consider moving this statement to an `else` block
Complete output(might be large): .ci-helpers/get_current_version.py:1:1: EXE001 Shebang is present but file is not executable
.ci-helpers/get_current_version.py:3:1: I001 [*] Import block is un-sorted or un-formatted
.ci-helpers/get_min_docstr_cov.py:1:1: EXE001 Shebang is present but file is not executable
.ci-helpers/get_min_docstr_cov.py:3:1: I001 [*] Import block is un-sorted or un-formatted
.ci-helpers/get_min_docstr_cov.py:5:1: F403 `from parse import *` used; unable to detect undefined names
.ci-helpers/get_min_docstr_cov.py:8:10: F405 `parse` may be undefined, or defined from star imports
.ci-helpers/get_next_version.py:1:1: EXE001 Shebang is present but file is not executable
.ci-helpers/get_next_version.py:3:1: I001 [*] Import block is un-sorted or un-formatted
.ci-helpers/update_credits.py:1:1: INP001 File `.ci-helpers/update_credits.py` is part of an implicit namespace package. Add an `__init__.py`.
.ci-helpers/update_credits.py:1:1: D209 [*] Multi-line docstring closing quotes should be on a separate line
.ci-helpers/update_credits.py:15:5: D202 [*] No blank lines allowed after function docstring (found 1)
.ci-helpers/update_credits.py:15:5: D209 [*] Multi-line docstring closing quotes should be on a separate line
.ci-helpers/update_credits.py:20:12: DTZ011 `datetime.date.today()` used
.ci-helpers/update_credits.py:24:20: S113 Probable use of requests call without timeout
.ci-helpers/update_credits.py:28:46: W605 [*] Invalid escape sequence: `\,`
.ci-helpers/update_credits.py:46:91: W291 Trailing whitespace
benchmarks/benchmark_base.py:43:9: ANN205 Missing return type annotation for staticmethod `get_relative_path`
benchmarks/benchmark_base.py:84:9: RET506 Unnecessary `else` after `raise` statement
benchmarks/benchmark_base.py:169:11: D106 Missing docstring in public nested class
benchmarks/benchmark_base.py:226:9: ANN205 Missing return type annotation for staticmethod `regression_data`
benchmarks/benchmark_base.py:341:9: RET505 Unnecessary `else` after `return` statement
benchmarks/opacities_opacity_state.py:5:1: I001 [*] Import block is un-sorted or un-formatted
benchmarks/opacities_opacity_state.py:5:17: F401 [*] `numpy` imported but unused
benchmarks/run_tardis.py:5:1: I001 [*] Import block is un-sorted or un-formatted
benchmarks/transport_montecarlo_estimators_radfield_estimator_calcs.py:5:1: I001 [*] Import block is un-sorted or un-formatted
benchmarks/transport_montecarlo_estimators_radfield_estimator_calcs.py:5:38: F401 [*] `tardis.opacities.opacities` imported but unused
benchmarks/transport_montecarlo_estimators_radfield_estimator_calcs.py:6:57: F401 [*] `tardis.transport.geometry.calculate_distances` imported but unused
benchmarks/transport_montecarlo_estimators_radfield_estimator_calcs.py:7:58: F401 [*] `tardis.transport.montecarlo.r_packet_transport` imported but unused
benchmarks/transport_montecarlo_estimators_radfield_estimator_calcs.py:8:45: F401 [*] `tardis.transport.montecarlo.utils` imported but unused
benchmarks/transport_montecarlo_interaction.py:5:1: I001 [*] Import block is un-sorted or un-formatted
benchmarks/transport_montecarlo_single_packet_loop.py:5:1: I001 [*] Import block is un-sorted or un-formatted
benchmarks/transport_montecarlo_vpacket.py:5:1: I001 [*] Import block is un-sorted or un-formatted
benchmarks/util/base.py:1:1: I001 [*] Import block is un-sorted or un-formatted
benchmarks/util/base.py:1:40: F401 [*] `os.path.join` imported but unused
benchmarks/util/base.py:2:27: F401 [*] `pathlib.PosixPath` imported but unused
benchmarks/util/nlte.py:1:1: I001 [*] Import block is un-sorted or un-formatted
docs/conf.py:1:1: UP009 [*] UTF-8 encoding declaration is unnecessary
docs/conf.py:28:1: I001 [*] Import block is un-sorted or un-formatted
docs/conf.py:31:8: F401 [*] `tardis` imported but unused
docs/conf.py:37:43: PGH004 Use specific rule codes when using `noqa`
docs/conf.py:47:6: UP015 [*] Unnecessary open mode parameters
docs/conf.py:68:1: F405 `exclude_patterns` may be undefined, or defined from star imports
docs/conf.py:69:1: F405 `exclude_patterns` may be undefined, or defined from star imports
docs/conf.py:70:1: F405 `exclude_patterns` may be undefined, or defined from star imports
docs/conf.py:71:1: F405 `exclude_patterns` may be undefined, or defined from star imports
docs/conf.py:72:1: F405 `exclude_patterns` may be undefined, or defined from star imports
docs/conf.py:139:1: W293 Blank line contains whitespace
docs/conf.py:174:1: W293 Blank line contains whitespace
docs/conf.py:191:13: UP030 Use implicit references for positional format fields
docs/conf.py:191:13: UP032 [*] Use f-string instead of `format` call
docs/conf.py:218:1: E402 Module level import not at top of file
docs/conf.py:291:4: E712 Avoid equality comparisons to `True`; use `if toml_config_tool_dict["tardis"]['edit_on_github']:` for truth checks
docs/conf.py:352:1: E402 Module level import not at top of file
docs/conf.py:367:10: UP015 [*] Unnecessary open mode parameters, use ""w""
docs/conf.py:382:10: UP015 [*] Unnecessary open mode parameters, use ""w""
docs/physics/pyplot/lte_ionization_balance.py:1:1: I001 [*] Import block is un-sorted or un-formatted
docs/physics/pyplot/lte_ionization_balance.py:1:8: F401 [*] `os` imported but unused
docs/physics/pyplot/lte_ionization_balance.py:22:31: F821 Undefined name `atom_fname`
docs/physics/pyplot/lte_ionization_balance.py:73:9: UP031 Use format specifiers instead of percent format
docs/physics/pyplot/lte_ionization_balance.py:74:15: UP031 Use format specifiers instead of percent format
docs/physics/pyplot/nebular_ionization_balance.py:1:1: I001 [*] Import block is un-sorted or un-formatted
docs/physics/pyplot/nebular_ionization_balance.py:33:18: F821 Undefined name `plasma`
docs/physics/pyplot/nebular_ionization_balance.py:71:9: UP031 Use format specifiers instead of percent format
docs/physics/pyplot/nebular_ionization_balance.py:72:15: UP031 Use format specifiers instead of percent format
docs/physics/pyplot/nebular_ionization_balance.py:117:9: UP031 Use format specifiers instead of percent format
docs/physics/pyplot/nebular_ionization_balance.py:118:15: UP031 Use format specifiers instead of percent format
docs/physics/pyplot/plot_mu_in_out_packet.py:1:1: F403 `from pylab import *` used; unable to detect undefined names
docs/physics/pyplot/plot_mu_in_out_packet.py:1:1: I001 [*] Import block is un-sorted or un-formatted
docs/physics/pyplot/plot_mu_in_out_packet.py:5:1: PLW0127 Self-assignment of variable `x`
docs/physics/pyplot/plot_mu_in_out_packet.py:5:4: PLW0127 Self-assignment of variable `y`
docs/physics/pyplot/plot_mu_in_out_packet.py:5:15: F405 `mgrid` may be undefined, or defined from star imports
docs/physics/pyplot/plot_mu_in_out_packet.py:10:1: F405 `xlabel` may be undefined, or defined from star imports
docs/physics/pyplot/plot_mu_in_out_packet.py:10:10: W605 [*] Invalid escape sequence: `\m`
docs/physics/pyplot/plot_mu_in_out_packet.py:11:1: F405 `ylabel` may be undefined, or defined from star imports
docs/physics/pyplot/plot_mu_in_out_packet.py:11:10: W605 [*] Invalid escape sequence: `\m`
docs/physics/pyplot/plot_mu_in_out_packet.py:12:1: F405 `imshow` may be undefined, or defined from star imports
docs/physics/pyplot/plot_mu_in_out_packet.py:12:8: F405 `np` may be undefined, or defined from star imports
docs/physics/pyplot/plot_mu_in_out_packet.py:13:1: F405 `colorbar` may be undefined, or defined from star imports
docs/physics/pyplot/plot_mu_in_out_packet.py:14:1: F405 `show` may be undefined, or defined from star imports
setup.py:7:1: I001 [*] Import block is un-sorted or un-formatted
tardis/__init__.py:6:31: PGH004 Use specific rule codes when using `noqa`
tardis/__init__.py:25:1: I001 [*] Import block is un-sorted or un-formatted
tardis/__init__.py:32:25: F401 `tardis.base.run_tardis` imported but unused; consider removing, adding to `__all__`, or using a redundant alias
tardis/__init__.py:33:46: F401 `tardis.io.util.yaml_load_file` imported but unused; consider removing, adding to `__all__`, or using a redundant alias
tardis/_astropy_init.py:12:1: I001 [*] Import block is un-sorted or un-formatted
tardis/analysis.py:96:9: E722 Do not use bare `except`
tardis/analysis.py:110:9: E722 Do not use bare `except`
tardis/analysis.py:121:9: E722 Do not use bare `except`
tardis/analysis.py:136:9: E722 Do not use bare `except`
tardis/analysis.py:374:9: RET505 Unnecessary `else` after `return` statement
tardis/analysis.py:396:9: RET505 Unnecessary `else` after `return` statement
tardis/analysis.py:421:9: RET505 Unnecessary `else` after `return` statement
tardis/analysis/opacities.py:1:1: INP001 File `tardis/analysis/opacities.py` is part of an implicit namespace package. Add an `__init__.py`.
tardis/analysis/opacities.py:1:1: D209 [*] Multi-line docstring closing quotes should be on a separate line
tardis/analysis/opacities.py:3:1: I001 [*] Import block is un-sorted or un-formatted
tardis/analysis/opacities.py:12:26: UP004 [*] Class `opacity_calculator` inherits from `object`
tardis/analysis/opacities.py:225:9: D209 [*] Multi-line docstring closing quotes should be on a separate line
tardis/analysis/opacities.py:274:9: D209 [*] Multi-line docstring closing quotes should be on a separate line
tardis/analysis/opacities.py:282:9: D202 [*] No blank lines allowed after function docstring (found 1)
tardis/analysis/opacities.py:288:29: W605 [*] Invalid escape sequence: `\D`
tardis/analysis/opacities.py:289:9: W605 [*] Invalid escape sequence: `\[`
tardis/analysis/opacities.py:290:11: W605 [*] Invalid escape sequence: `\c`
tardis/analysis/opacities.py:290:17: W605 [*] Invalid escape sequence: `\m`
tardis/analysis/opacities.py:290:44: W605 [*] Invalid escape sequence: `\D`
tardis/analysis/opacities.py:290:70: W605 [*] Invalid escape sequence: `\s`
tardis/analysis/opacities.py:291:11: W605 [*] Invalid escape sequence: `\l`
tardis/analysis/opacities.py:291:21: W605 [*] Invalid escape sequence: `\e`
tardis/analysis/opacities.py:291:33: W605 [*] Invalid escape sequence: `\m`
tardis/analysis/opacities.py:292:9: W605 [*] Invalid escape sequence: `\]`
tardis/analysis/opacities.py:329:9: D202 [*] No blank lines allowed after function docstring (found 1)
tardis/analysis/opacities.py:331:9: W605 [*] Invalid escape sequence: `\[`
tardis/analysis/opacities.py:332:11: W605 [*] Invalid escape sequence: `\c`
tardis/analysis/opacities.py:332:17: W605 [*] Invalid escape sequence: `\m`
tardis/analysis/opacities.py:332:40: W605 [*] Invalid escape sequence: `\m`
tardis/analysis/opacities.py:332:52: W605 [*] Invalid escape sequence: `\s`
tardis/analysis/opacities.py:332:60: W605 [*] Invalid escape sequence: `\m`
tardis/analysis/opacities.py:333:9: W605 [*] Invalid escape sequence: `\]`
tardis/analysis/opacities.py:360:9: D202 [*] No blank lines allowed after function docstring (found 1)
tardis/analysis/opacities.py:388:9: D202 [*] No blank lines allowed after function docstring (found 1)
tardis/base.py:5:1: I001 [*] Import block is un-sorted or un-formatted
tardis/base.py:73:1: I001 [*] Import block is un-sorted or un-formatted
tardis/base.py:101:13: PLW0127 Self-assignment of variable `atom_data`
tardis/conftest.py:1:1: I001 [*] Import block is un-sorted or un-formatted
tardis/conftest.py:11:1: F403 `from tardis.tests.fixtures.atom_data import *` used; unable to detect undefined names
tardis/conftest.py:30:49: PGH004 Use specific rule codes when using `noqa`
tardis/conftest.py:32:9: F821 Undefined name `pytest_report_header`
tardis/conftest.py:145:5: RET505 Unnecessary `else` after `return` statement
tardis/conftest.py:169:1: PT020 `@pytest.yield_fixture` is deprecated, use `@pytest.fixture`
tardis/conftest.py:240:19: F405 `deepcopy` may be undefined, or defined from star imports
tardis/conftest.py:249:19: F405 `deepcopy` may be undefined, or defined from star imports
tardis/conftest.py:278:19: F405 `deepcopy` may be undefined, or defined from star imports
tardis/constants.py:1:1: F403 `from astropy.constants.astropyconst13 import *` used; unable to detect undefined names
tardis/energy_input/GXPacket.py:1:1: N999 Invalid module name: 'GXPacket'
tardis/energy_input/GXPacket.py:1:1: I001 [*] Import block is un-sorted or un-formatted
tardis/energy_input/GXPacket.py:40:16: UP004 [*] Class `GXPacket` inherits from `object`
tardis/energy_input/GXPacket.py:72:9: D407 [*] Missing dashed underline after section ("Returns")
tardis/energy_input/GXPacket.py:72:9: D406 [*] Section name should end with a newline ("Returns")
tardis/energy_input/GXPacket.py:198:13: F821 Undefined name `get_chain_decay_power_per_ejectamass`
tardis/energy_input/GXPacket.py:199:17: F821 Undefined name `inventory`
tardis/energy_input/energy_source.py:1:1: I001 [*] Import block is un-sorted or un-formatted
tardis/energy_input/energy_source.py:96:11: E712 Avoid equality comparisons to `True`; use `if check:` for truth checks
tardis/energy_input/energy_source.py:112:16: C416 Unnecessary `list` comprehension (rewrite using `list()`)
tardis/energy_input/energy_source.py:198:5: D202 [*] No blank lines allowed after function docstring (found 1)
tardis/energy_input/gamma_packet_loop.py:273:17: RET508 Unnecessary `else` after `break` statement
tardis/energy_input/gamma_ray_channel.py:1:1: I001 [*] Import block is un-sorted or un-formatted
tardis/energy_input/gamma_ray_channel.py:2:17: F401 [*] `numpy` imported but unused
tardis/energy_input/gamma_ray_channel.py:54:5: D411 [*] Missing blank line before section ("Returns")
tardis/energy_input/gamma_ray_channel.py:111:5: D202 [*] No blank lines allowed after function docstring (found 1)
tardis/energy_input/gamma_ray_estimators.py:47:18: F821 Undefined name `GET_NEAREST_LINE_REDWARD_FUNCTION`
tardis/energy_input/gamma_ray_grid.py:1:1: I001 [*] Import block is un-sorted or un-formatted
tardis/energy_input/gamma_ray_grid.py:14:5: D202 [*] No blank lines allowed after function docstring (found 1)
tardis/energy_input/gamma_ray_transport.py:456:39: PERF102 When using only the values of a dict use the `values()` method
tardis/energy_input/main_gamma_ray_loop.py:1:1: I001 [*] Import block is un-sorted or un-formatted
tardis/energy_input/main_gamma_ray_loop.py:12:5: F401 [*] `tardis.energy_input.gamma_ray_channel.calculate_total_decays` imported but unused
tardis/energy_input/main_gamma_ray_loop.py:13:5: F401 [*] `tardis.energy_input.gamma_ray_channel.create_inventories_dict` imported but unused
tardis/energy_input/main_gamma_ray_loop.py:14:5: F401 [*] `tardis.energy_input.gamma_ray_channel.create_isotope_dicts` imported but unused
tardis/energy_input/main_gamma_ray_loop.py:152:17: G004 Logging statement uses f-string
tardis/energy_input/main_gamma_ray_loop.py:156:17: G004 Logging statement uses f-string
tardis/energy_input/main_gamma_ray_loop.py:158:17: G004 Logging statement uses f-string
tardis/energy_input/main_gamma_ray_loop.py:213:17: G004 Logging statement uses f-string
tardis/energy_input/main_gamma_ray_loop.py:214:17: G004 Logging statement uses f-string
tardis/energy_input/tests/conftest.py:1:1: I001 [*] Import block is un-sorted or un-formatted
tardis/energy_input/tests/conftest.py:24:9: S604 Function call with truthy `shell` parameter identified, security issue
tardis/energy_input/tests/test_energy_source.py:35:5: PT015 Assertion always fails, replace with `pytest.fail()`
tardis/energy_input/tests/test_energy_source.py:35:12: B011 Do not `assert False` (`python -O` removes these calls), raise `AssertionError()`
tardis/energy_input/tests/test_energy_source.py:41:5: PT015 Assertion always fails, replace with `pytest.fail()`
tardis/energy_input/tests/test_energy_source.py:41:12: B011 Do not `assert False` (`python -O` removes these calls), raise `AssertionError()`
tardis/energy_input/tests/test_energy_source.py:47:5: PT015 Assertion always fails, replace with `pytest.fail()`
tardis/energy_input/tests/test_energy_source.py:47:12: B011 Do not `assert False` (`python -O` removes these calls), raise `AssertionError()`
tardis/energy_input/tests/test_gamma_ray_channel.py:1:1: I001 [*] Import block is un-sorted or un-formatted
tardis/energy_input/tests/test_gamma_ray_channel.py:8:30: F401 [*] `radioactivedecay.converters` imported but unused
tardis/energy_input/tests/test_gamma_ray_channel.py:13:5: F401 [*] `tardis.energy_input.energy_source.get_nuclear_lines_database` imported but unused
tardis/energy_input/tests/test_gamma_ray_channel.py:118:9: B020 Loop control variable `isotope_dict` overrides iterable it iterates
tardis/energy_input/tests/test_gamma_ray_grid.py:1:1: I001 [*] Import block is un-sorted or un-formatted
tardis/energy_input/tests/test_gamma_ray_grid.py:3:17: F401 [*] `numpy` imported but unused
tardis/energy_input/tests/test_gamma_ray_grid.py:6:5: F401 [*] `tardis.energy_input.gamma_ray_grid.calculate_distance_radial` imported but unused
tardis/energy_input/tests/test_gamma_ray_grid.py:7:5: F401 [*] `tardis.energy_input.gamma_ray_grid.distance_trace` imported but unused
tardis/energy_input/tests/test_gamma_ray_grid.py:15:5: PT015 Assertion always fails, replace with `pytest.fail()`
tardis/energy_input/tests/test_gamma_ray_grid.py:15:12: B011 Do not `assert False` (`python -O` removes these calls), raise `AssertionError()`
tardis/energy_input/tests/test_gamma_ray_grid.py:21:5: PT015 Assertion always fails, replace with `pytest.fail()`
tardis/energy_input/tests/test_gamma_ray_grid.py:21:12: B011 Do not `assert False` (`python -O` removes these calls), raise `AssertionError()`
tardis/energy_input/tests/test_gamma_ray_interactions.py:1:1: I001 [*] Import block is un-sorted or un-formatted
tardis/energy_input/tests/test_gamma_ray_interactions.py:6:5: F401 [*] `tardis.energy_input.gamma_ray_interactions.compton_scatter` imported but unused
tardis/energy_input/tests/test_gamma_ray_interactions.py:18:5: PT015 Assertion always fails, replace with `pytest.fail()`
tardis/energy_input/tests/test_gamma_ray_interactions.py:18:12: B011 Do not `assert False` (`python -O` removes these calls), raise `AssertionError()`
tardis/energy_input/tests/test_gamma_ray_interactions.py:24:5: PT015 Assertion always fails, replace with `pytest.fail()`
tardis/energy_input/tests/test_gamma_ray_interactions.py:24:12: B011 Do not `assert False` (`python -O` removes these calls), raise `AssertionError()`
tardis/energy_input/tests/test_gamma_ray_transport.py:4:17: F401 [*] `numpy` imported but unused
tardis/energy_input/tests/test_gamma_ray_transport.py:5:25: F401 [*] `numpy.testing` imported but unused
tardis/energy_input/tests/test_gamma_ray_transport.py:7:28: F401 [*] `radioactivedecay` imported but unused
tardis/energy_input/tests/test_gamma_ray_transport.py:8:30: F401 [*] `radioactivedecay.converters` imported but unused
tardis/energy_input/tests/test_gamma_ray_transport.py:11:5: F401 [*] `tardis.energy_input.gamma_ray_channel.calculate_total_decays` imported but unused
tardis/energy_input/tests/test_gamma_ray_transport.py:12:5: F401 [*] `tardis.energy_input.gamma_ray_channel.create_inventories_dict` imported but unused
tardis/energy_input/tests/test_gamma_ray_transport.py:13:5: F401 [*] `tardis.energy_input.gamma_ray_channel.create_isotope_dicts` imported but unused
tardis/energy_input/tests/test_util.py:38:5: PT015 Assertion always fails, replace with `pytest.fail()`
tardis/energy_input/tests/test_util.py:38:12: B011 Do not `assert False` (`python -O` removes these calls), raise `AssertionError()`
tardis/energy_input/tests/test_util.py:44:5: PT015 Assertion always fails, replace with `pytest.fail()`
tardis/energy_input/tests/test_util.py:44:12: B011 Do not `assert False` (`python -O` removes these calls), raise `AssertionError()`
tardis/energy_input/tests/test_util.py:50:5: PT015 Assertion always fails, replace with `pytest.fail()`
tardis/energy_input/tests/test_util.py:50:12: B011 Do not `assert False` (`python -O` removes these calls), raise `AssertionError()`
tardis/energy_input/tests/test_util.py:56:5: PT015 Assertion always fails, replace with `pytest.fail()`
tardis/energy_input/tests/test_util.py:56:12: B011 Do not `assert False` (`python -O` removes these calls), raise `AssertionError()`
tardis/energy_input/util.py:383:5: RET505 Unnecessary `elif` after `return` statement
tardis/grid/__init__.py:2:41: W291 Trailing whitespace
tardis/grid/__init__.py:3:37: W291 Trailing whitespace
tardis/grid/__init__.py:7:1: F403 `from tardis.grid.base import *` used; unable to detect undefined names
tardis/grid/base.py:1:1: I001 [*] Import block is un-sorted or un-formatted
tardis/grid/base.py:7:33: F401 [*] `tardis.io.atom_data.AtomData` imported but unused
tardis/grid/base.py:33:5: PLR1711 [*] Useless `return` statement at end of function
tardis/grid/base.py:70:9: PLR1711 [*] Useless `return` statement at end of function
tardis/grid/base.py:147:9: PLR1711 [*] Useless `return` statement at end of function
tardis/grid/tests/test_grid.py:1:1: INP001 File `tardis/grid/tests/test_grid.py` is part of an implicit namespace package. Add an `__init__.py`.
tardis/grid/tests/test_grid.py:1:1: I001 [*] Import block is un-sorted or un-formatted
tardis/grid/tests/test_grid.py:8:21: F811 [*] Redefinition of unused `Path` from line 1
tardis/gui/__init__.py:4:57: W291 Trailing whitespace
tardis/gui/__init__.py:5:60: W291 Trailing whitespace
tardis/gui/__init__.py:6:56: W291 Trailing whitespace
tardis/gui/datahandler.py:1:1: I001 [*] Import block is un-sorted or un-formatted
tardis/gui/datahandler.py:4:17: F401 [*] `numpy` imported but unused
tardis/gui/datahandler.py:5:8: ICN001 `matplotlib` should be imported as `mpl`
tardis/gui/datahandler.py:6:28: F401 [*] `matplotlib.pylab` imported but unused
tardis/gui/datahandler.py:10:1: I001 [*] Import block is un-sorted or un-formatted
tardis/gui/datahandler.py:12:1: I001 [*] Import block is un-sorted or un-formatted
tardis/gui/datahandler.py:19:1: I001 [*] Import block is un-sorted or un-formatted
tardis/gui/datahandler.py:19:8: F401 [*] `yaml` imported but unused
tardis/gui/datahandler.py:21:20: F401 [*] `tardis.run_tardis` imported but unused
tardis/gui/datahandler.py:22:32: F401 [*] `tardis.gui.widgets.MatplotlibWidget` imported but unused
tardis/gui/datahandler.py:22:50: F401 [*] `tardis.gui.widgets.ModelViewer` imported but unused
tardis/gui/datahandler.py:22:63: F401 [*] `tardis.gui.widgets.ShellInfo` imported but unused
tardis/gui/datahandler.py:23:32: F401 [*] `tardis.gui.widgets.LineInfo` imported but unused
tardis/gui/datahandler.py:23:42: F401 [*] `tardis.gui.widgets.LineInteractionTables` imported but unused
tardis/gui/datahandler.py:37:12: UP004 [*] Class `Node` inherits from `object`
tardis/gui/datahandler.py:113:9: RET505 Unnecessary `else` after `return` statement
tardis/gui/datahandler.py:145:9: RET505 Unnecessary `else` after `return` statement
tardis/gui/datahandler.py:199:9: RET505 Unnecessary `else` after `return` statement
tardis/gui/datahandler.py:203:9: D209 [*] Multi-line docstring closing quotes should be on a separate line
tardis/gui/datahandler.py:271:9: RET505 Unnecessary `else` after `return` statement
tardis/gui/datahandler.py:412:9: RET505 Unnecessary `elif` after `return` statement
tardis/gui/datahandler.py:436:9: RET505 Unnecessary `else` after `return` statement
tardis/gui/datahandler.py:503:14: UP008 Use `super()` instead of `super(__class__, self)`
tardis/gui/datahandler.py:518:9: PLR0911 Too many return statements (8 > 6)
tardis/gui/datahandler.py:523:13: RET505 Unnecessary `elif` after `return` statement
tardis/gui/datahandler.py:526:17: RET505 Unnecessary `else` after `return` statement
tardis/gui/datahandler.py:536:13: RET505 Unnecessary `elif` after `return` statement
tardis/gui/datahandler.py:547:9: RET505 Unnecessary `elif` after `return` statement
tardis/gui/datahandler.py:552:9: D209 [*] Multi-line docstring closing quotes should be on a separate line
tardis/gui/datahandler.py:556:9: RET505 Unnecessary `elif` after `return` statement
tardis/gui/interface.py:6:25: F401 [*] `PySide2.QtCore` imported but unused
tardis/gui/interface.py:16:1: I001 [*] Import block is un-sorted or un-formatted
tardis/gui/interface.py:23:1: I001 [*] Import block is un-sorted or un-formatted
tardis/gui/tests/test_gui.py:1:1: I001 [*] Import block is un-sorted or un-formatted
tardis/gui/tests/test_gui.py:5:25: F401 [*] `astropy.units` imported but unused
tardis/gui/tests/test_gui.py:8:1: I001 [*] Import block is un-sorted or un-formatted
tardis/gui/widgets.py:6:1: I001 [*] Import block is un-sorted or un-formatted
tardis/gui/widgets.py:8:1: I001 [*] Import block is un-sorted or un-formatted
tardis/gui/widgets.py:16:1: I001 [*] Import block is un-sorted or un-formatted
tardis/gui/widgets.py:16:8: ICN001 `matplotlib` should be imported as `mpl`
tardis/gui/widgets.py:17:1: F403 `from matplotlib.figure import *` used; unable to detect undefined names
tardis/gui/widgets.py:24:32: F401 [*] `matplotlib.patches.Circle` imported but unused
tardis/gui/widgets.py:29:30: F401 [*] `tardis.util` imported but unused
tardis/gui/widgets.py:36:9: D202 [*] No blank lines allowed after function docstring (found 1)
tardis/gui/widgets.py:43:23: F405 `Figure` may be undefined, or defined from star imports
tardis/gui/widgets.py:54:14: UP008 Use `super()` instead of `super(__class__, self)`
tardis/gui/widgets.py:55:14: UP008 Use `super()` instead of `super(__class__, self)`
tardis/gui/widgets.py:58:14: UP008 Use `super()` instead of `super(__class__, self)`
tardis/gui/widgets.py:164:27: C408 Unnecessary `dict` call (rewrite as a literal)
tardis/gui/widgets.py:167:26: C408 Unnecessary `dict` call (rewrite as a literal)
tardis/gui/widgets.py:168:23: C408 Unnecessary `dict` call (rewrite as a literal)
tardis/gui/widgets.py:186:9: RET505 Unnecessary `elif` after `return` statement
tardis/gui/widgets.py:198:14: UP008 Use `super()` instead of `super(__class__, self)`
tardis/gui/widgets.py:226:14: UP008 Use `super()` instead of `super(__class__, self)`
tardis/gui/widgets.py:229:22: F405 `yaml` may be undefined, or defined from star imports
tardis/gui/widgets.py:229:61: F405 `yaml` may be undefined, or defined from star imports
tardis/gui/widgets.py:353:24: F405 `TreeModel` may be undefined, or defined from star imports
tardis/gui/widgets.py:358:38: F405 `TreeDelegate` may be undefined, or defined from star imports
tardis/gui/widgets.py:429:35: UP024 [*] Replace aliased errors with `OSError`
tardis/gui/widgets.py:444:9: PIE790 [*] Unnecessary `pass` statement
tardis/gui/widgets.py:528:9: D202 [*] No blank lines allowed after function docstring (found 1)
tardis/gui/widgets.py:646:41: F405 `np` may be undefined, or defined from star imports
tardis/gui/widgets.py:657:9: D209 [*] Multi-line docstring closing quotes should be on a separate line
tardis/gui/widgets.py:660:41: F405 `np` may be undefined, or defined from star imports
tardis/gui/widgets.py:688:41: F405 `np` may be undefined, or defined from star imports
tardis/gui/widgets.py:815:14: UP008 Use `super()` instead of `super(__class__, self)`
tardis/gui/widgets.py:851:9: D209 [*] Multi-line docstring closing quotes should be on a separate line
tardis/gui/widgets.py:927:9: D209 [*] Multi-line docstring closing quotes should be on a separate line
tardis/gui/widgets.py:929:14: UP008 Use `super()` instead of `super(__class__, self)`
tardis/gui/widgets.py:1124:14: UP008 Use `super()` instead of `super(__class__, self)`
tardis/gui/widgets.py:1231:9: D202 [*] No blank lines allowed after function docstring (found 1)
tardis/io/atom_data/__init__.py:2:38: W291 Trailing whitespace
tardis/io/atom_data/__init__.py:5:1: I001 [*] Import block is un-sorted or un-formatted
tardis/io/atom_data/__init__.py:5:38: F401 `tardis.io.atom_data.base.AtomData` imported but unused; consider removing, adding to `__all__`, or using a redundant alias
tardis/io/atom_data/__init__.py:6:51: F401 `tardis.io.atom_data.atom_web_download.download_atom_data` imported but unused; consider removing, adding to `__all__`, or using a redundant alias
tardis/io/atom_data/atom_web_download.py:51:13: G004 Logging statement uses f-string
tardis/io/atom_data/atom_web_download.py:58:17: G004 Logging statement uses f-string
tardis/io/atom_data/base.py:171:22: C408 Unnecessary `dict` call (rewrite as a literal)
tardis/io/atom_data/base.py:172:24: C408 Unnecessary `list` call (rewrite as a literal)
tardis/io/atom_data/base.py:181:34: G004 Logging statement uses f-string
tardis/io/atom_data/base.py:259:17: G004 Logging statement uses f-string
tardis/io/atom_data/base.py:263:21: UP030 Use implicit references for positional format fields
tardis/io/atom_data/base.py:263:21: G001 Logging statement uses `str.format`
tardis/io/atom_data/util.py:1:1: I001 [*] Import block is un-sorted or un-formatted
tardis/io/atom_data/util.py:8:5: F401 [*] `tardis.io.atom_data.atom_web_download.download_atom_data` imported but unused
tardis/io/atom_data/util.py:15:5: D202 [*] No blank lines allowed after function docstring (found 1)
tardis/io/atom_data/util.py:37:13: G004 Logging statement uses f-string
tardis/io/atom_data/util.py:44:15: UP024 [*] Replace aliased errors with `OSError`
tardis/io/atom_data/util.py:50:11: UP024 [*] Replace aliased errors with `OSError`
tardis/io/configuration/config_internal.py:1:1: E401 [*] Multiple imports on one line
tardis/io/configuration/config_internal.py:1:1: I001 [*] Import block is un-sorted or un-formatted
tardis/io/configuration/config_internal.py:6:20: N812 Lowercase `__path__` imported as non-lowercase `TARDIS_PATH`
tardis/io/configuration/config_internal.py:23:13: G004 Logging statement uses f-string
tardis/io/configuration/config_internal.py:36:13: G004 Logging statement uses f-string
tardis/io/configuration/config_internal.py:49:15: UP024 [*] Replace aliased errors with `OSError`
tardis/io/configuration/config_reader.py:53:29: G004 Logging statement uses f-string
tardis/io/configuration/config_reader.py:88:21: C408 Unnecessary `dict` call (rewrite as a literal)
tardis/io/configuration/config_reader.py:112:21: UP008 Use `super()` instead of `super(__class__, self)`
tardis/io/configuration/config_reader.py:117:9: RET505 Unnecessary `else` after `return` statement
tardis/io/configuration/config_reader.py:118:18: UP008 Use `super()` instead of `super(__class__, self)`
tardis/io/configuration/config_reader.py:141:13: RET505 Unnecessary `else` after `return` statement
tardis/io/configuration/config_reader.py:218:29: G004 Logging statement uses f-string
tardis/io/configuration/config_reader.py:450:14: UP008 Use `super()` instead of `super(__class__, self)`
tardis/io/configuration/config_validator.py:43:9: UP028 Replace `yield` over `for` loop with `yield from`
tardis/io/configuration/tests/test_config_reader.py:1:1: INP001 File `tardis/io/configuration/tests/test_config_reader.py` is part of an implicit namespace package. Add an `__init__.py`.
tardis/io/configuration/tests/test_config_reader.py:2:1: I001 [*] Import block is un-sorted or un-formatted
tardis/io/configuration/tests/test_config_reader.py:2:8: F401 [*] `os` imported but unused
tardis/io/configuration/tests/test_config_reader.py:3:18: F401 [*] `attr.validate` imported but unused
tardis/io/configuration/tests/test_config_validator.py:1:1: INP001 File `tardis/io/configuration/tests/test_config_validator.py` is part of an implicit namespace package. Add an `__init__.py`.
tardis/io/configuration/tests/test_configuration_namespace.py:1:1: INP001 File `tardis/io/configuration/tests/test_configuration_namespace.py` is part of an implicit namespace package. Add an `__init__.py`.
tardis/io/configuration/tests/test_configuration_namespace.py:1:1: I001 [*] Import block is un-sorted or un-formatted
tardis/io/logger/__init__.py:2:29: W291 Trailing whitespace
tardis/io/logger/colored_logger.py:83:9: PLR1711 [*] Useless `return` statement at end of function
tardis/io/logger/logger.py:4:63: F401 [*] `tardis.io.logger.colored_logger.formatter_message` imported but unused
tardis/io/logger/logger.py:28:17: UP004 [*] Class `FilterLog` inherits from `object`
tardis/io/logger/logger.py:66:5: D202 [*] No blank lines allowed after function docstring (found 1)
tardis/io/logger/logger.py:118:12: E713 [*] Test for membership should be `not in`
tardis/io/logger/montecarlo_tracking.py:2:23: F401 [*] `functools.wraps` imported but unused
tardis/io/logger/montecarlo_tracking.py:63:30: G004 Logging statement uses f-string
tardis/io/logger/montecarlo_tracking.py:64:30: G004 Logging statement uses f-string
tardis/io/logger/tests/test_logging.py:1:1: I001 [*] Import block is un-sorted or un-formatted
tardis/io/logger/tests/test_logging.py:8:8: F811 [*] Redefinition of unused `pytest` from line 1
tardis/io/logger/tests/test_logging.py:70:16: E712 Avoid equality comparisons to `True`; use `if specific_log_level:` for truth checks
tardis/io/logger/tests/test_logging.py:88:16: E712 Avoid equality comparisons to `True`; use `if specific_log_level:` for truth checks
tardis/io/logger/tests/test_logging.py:110:16: E712 Avoid equality comparisons to `True`; use `if specific_log_level:` for truth checks
tardis/io/model/__init__.py:1:1: I001 [*] Import block is un-sorted or un-formatted
tardis/io/model/__init__.py:1:44: F401 `tardis.io.model.readers.stella.read_stella_model` imported but unused; consider removing, adding to `__all__`, or using a redundant alias
tardis/io/model/__init__.py:4:44: F401 `tardis.io.model.readers.cmfgen.read_cmfgen_model` imported but unused; consider removing, adding to `__all__`, or using a redundant alias
tardis/io/model/parse_atom_data.py:40:21: G004 Logging statement uses f-string
tardis/io/model/parse_density_configuration.py:23:6: FA100 Add `from __future__ import annotations` to simplify `typing.Tuple`
tardis/io/model/parse_geometry_configuration.py:50:12: PTH117 `os.path.isabs()` should be replaced by `Path.is_absolute()`
tardis/io/model/parse_mass_fraction_configuration.py:62:12: PTH117 `os.path.isabs()` should be replaced by `Path.is_absolute()`
tardis/io/model/parse_radiation_field_configuration.py:118:13: G004 Logging statement uses f-string
tardis/io/model/readers/arepo.py:1:1: I001 [*] Import block is un-sorted or un-formatted
tardis/io/model/readers/arepo.py:19:9: D202 [*] No blank lines allowed after function docstring (found 1)
tardis/io/model/readers/arepo.py:129:9: D202 [*] No blank lines allowed after function docstring (found 1)
tardis/io/model/readers/arepo.py:178:9: D202 [*] No blank lines allowed after function docstring (found 1)
tardis/io/model/readers/arepo.py:256:19: UP032 [*] Use f-string instead of `format` call
tardis/io/model/readers/arepo.py:268:9: D202 [*] No blank lines allowed after function docstring (found 1)
tardis/io/model/readers/arepo.py:384:9: D202 [*] No blank lines allowed after function docstring (found 1)
tardis/io/model/readers/arepo.py:429:25: UP032 [*] Use f-string instead of `format` call
tardis/io/model/readers/arepo.py:432:25: UP032 [*] Use f-string instead of `format` call
tardis/io/model/readers/arepo.py:453:29: UP031 Use format specifiers instead of percent format
tardis/io/model/readers/arepo.py:454:29: UP031 Use format specifiers instead of percent format
tardis/io/model/readers/arepo.py:461:17: FLY002 Consider `"\n---\n"` instead of string join
tardis/io/model/readers/arepo.py:472:35: UP031 Use format specifiers instead of percent format
tardis/io/model/readers/arepo.py:473:31: UP031 Use format specifiers instead of percent format
tardis/io/model/readers/arepo.py:501:29: UP031 Use format specifiers instead of percent format
tardis/io/model/readers/arepo.py:502:25: UP031 Use format specifiers instead of percent format
tardis/io/model/readers/arepo.py:537:9: D202 [*] No blank lines allowed after function docstring (found 1)
tardis/io/model/readers/arepo.py:707:9: D202 [*] No blank lines allowed after function docstring (found 1)
tardis/io/model/readers/artis.py:1:1: I001 [*] Import block is un-sorted or un-formatted
tardis/io/model/readers/artis.py:7:5: D202 [*] No blank lines allowed after function docstring (found 1)
tardis/io/model/readers/base.py:1:1: I001 [*] Import block is un-sorted or un-formatted
tardis/io/model/readers/base.py:25:5: D202 [*] No blank lines allowed after function docstring (found 1)
tardis/io/model/readers/blondin_toymodel.py:31:10: UP015 [*] Unnecessary open mode parameters
tardis/io/model/readers/blondin_toymodel.py:94:10: UP015 [*] Unnecessary open mode parameters
tardis/io/model/readers/cmfgen.py:1:1: I001 [*] Import block is un-sorted or un-formatted
tardis/io/model/readers/cmfgen.py:4:21: F401 [*] `pathlib.Path` imported but unused
tardis/io/model/readers/cmfgen.py:27:5: D412 [*] No blank lines allowed between a section header and its content ("Parameters")
tardis/io/model/readers/cmfgen_deprecated.py:1:1: I001 [*] Import block is un-sorted or un-formatted
tardis/io/model/readers/cmfgen_deprecated.py:73:5: D202 [*] No blank lines allowed after function docstring (found 1)
tardis/io/model/readers/csvy.py:1:1: I001 [*] Import block is un-sorted or un-formatted
tardis/io/model/readers/csvy.py:100:5: D202 [*] No blank lines allowed after function docstring (found 1)
tardis/io/model/readers/generic_readers.py:1:21: F401 [*] `pathlib.Path` imported but unused
tardis/io/model/readers/generic_readers.py:21:6: FA100 Add `from __future__ import annotations` to simplify `typing.Tuple`
tardis/io/model/readers/generic_readers.py:48:12: NPY201 `np.recfromtxt` will be removed in NumPy 2.0. Use `np.genfromtxt` instead.
tardis/io/model/readers/stella.py:32:5: D412 [*] No blank lines allowed between a section header and its content ("Parameters")
tardis/io/model/readers/stella.py:53:17: RET508 Unnecessary `else` after `break` statement
tardis/io/model/readers/tests/test_arepo_parser.py:1:1: INP001 File `tardis/io/model/readers/tests/test_arepo_parser.py` is part of an implicit namespace package. Add an `__init__.py`.
tardis/io/model/readers/tests/test_arepo_parser.py:1:1: I001 [*] Import block is un-sorted or un-formatted
tardis/io/model/readers/tests/test_arepo_parser.py:16:10: UP015 [*] Unnecessary open mode parameters
tardis/io/model/readers/tests/test_arepo_parser.py:48:10: UP015 [*] Unnecessary open mode parameters
tardis/io/model/readers/tests/test_arepo_parser.py:59:10: UP015 [*] Unnecessary open mode parameters
tardis/io/model/readers/tests/test_arepo_parser.py:89:10: UP015 [*] Unnecessary open mode parameters
tardis/io/model/readers/tests/test_arepo_parser.py:99:10: UP015 [*] Unnecessary open mode parameters
tardis/io/model/readers/tests/test_arepo_parser.py:109:10: UP015 [*] Unnecessary open mode parameters
tardis/io/model/readers/tests/test_ascii_readers.py:1:1: INP001 File `tardis/io/model/readers/tests/test_ascii_readers.py` is part of an implicit namespace package. Add an `__init__.py`.
tardis/io/model/readers/tests/test_ascii_readers.py:1:1: I001 [*] Import block is un-sorted or un-formatted
tardis/io/model/readers/tests/test_ascii_readers.py:3:20: F401 [*] `tardis.io` imported but unused
tardis/io/model/readers/tests/test_ascii_readers.py:10:17: F401 [*] `numpy` imported but unused
tardis/io/model/readers/tests/test_ascii_readers.py:12:21: F401 [*] `pathlib.Path` imported but unused
tardis/io/model/readers/tests/test_cmfgen_reader.py:1:1: INP001 File `tardis/io/model/readers/tests/test_cmfgen_reader.py` is part of an implicit namespace package. Add an `__init__.py`.
tardis/io/model/readers/tests/test_cmfgen_reader.py:1:1: I001 [*] Import block is un-sorted or un-formatted
tardis/io/model/readers/tests/test_cmfgen_reader.py:5:1: PT013 Incorrect import of `pytest`; use `import pytest` instead
tardis/io/model/readers/tests/test_cmfgen_reader.py:6:30: F401 [*] `astropy.units` imported but unused
tardis/io/model/readers/tests/test_csvy_reader.py:1:1: INP001 File `tardis/io/model/readers/tests/test_csvy_reader.py` is part of an implicit namespace package. Add an `__init__.py`.
tardis/io/model/readers/tests/test_csvy_reader.py:1:1: I001 [*] Import block is un-sorted or un-formatted
tardis/io/model/readers/tests/test_csvy_reader.py:5:38: F401 [*] `jsonschema.exceptions` imported but unused
tardis/io/model/readers/tests/test_csvy_reader.py:8:30: F401 [*] `astropy.units` imported but unused
tardis/io/model/readers/tests/test_csvy_reader.py:48:10: B017 `pytest.raises(Exception)` should be considered evil
tardis/io/model/readers/tests/test_stella_reader.py:1:1: INP001 File `tardis/io/model/readers/tests/test_stella_reader.py` is part of an implicit namespace package. Add an `__init__.py`.
tardis/io/model/readers/tests/test_stella_reader.py:1:1: I001 [*] Import block is un-sorted or un-formatted
tardis/io/model/readers/tests/test_stella_reader.py:5:1: PT013 Incorrect import of `pytest`; use `import pytest` instead
tardis/io/tests/test_HDFWriter.py:1:1: N999 Invalid module name: 'test_HDFWriter'
tardis/io/tests/test_HDFWriter.py:1:1: I001 [*] Import block is un-sorted or un-formatted
tardis/io/tests/test_HDFWriter.py:6:27: F401 [*] `numpy.testing.assert_almost_equal` imported but unused
tardis/io/tests/test_atomic.py:1:1: I001 [*] Import block is un-sorted or un-formatted
tardis/io/tests/test_decay.py:1:1: I001 [*] Import block is un-sorted or un-formatted
tardis/io/tests/test_model_reader.py:1:8: F401 [*] `h5py` imported but unused
tardis/io/util.py:18:20: N812 Lowercase `__path__` imported as non-lowercase `TARDIS_PATH`
tardis/io/util.py:62:24: UP004 [*] Class `MockRegexPattern` inherits from `object`
tardis/io/util.py:163:34: F821 Undefined name `basestring`
tardis/io/util.py:191:22: UP004 [*] Class `HDFWriterMixin` inherits from `object`
tardis/io/util.py:193:25: UP008 Use `super()` instead of `super(__class__, self)`
tardis/io/util.py:239:9: RET506 Unnecessary `else` after `raise` statement
tardis/io/util.py:328:21: G004 Logging statement uses f-string
tardis/io/util.py:385:14: UP008 Use `super()` instead of `super(__class__, self)`
tardis/io/util.py:392:5: D202 [*] No blank lines allowed after function docstring (found 1)
tardis/io/util.py:415:13: G004 Logging statement uses f-string
tardis/model/__init__.py:2:44: W291 Trailing whitespace
tardis/model/__init__.py:4:53: W291 Trailing whitespace
tardis/model/__init__.py:5:46: W291 Trailing whitespace
tardis/model/__init__.py:9:31: F401 `tardis.model.base.SimulationState` imported but unused; consider removing, adding to `__all__`, or using a redundant alias
tardis/model/base.py:339:12: PTH117 `os.path.isabs()` should be replaced by `Path.is_absolute()`
tardis/model/base.py:352:27: C403 Unnecessary `list` comprehension (rewrite as a `set` comprehension)
tardis/model/base.py:365:27: C403 Unnecessary `list` comprehension (rewrite as a `set` comprehension)
tardis/model/base.py:376:21: G004 Logging statement uses f-string
tardis/model/geometry/radial1d.py:1:1: I001 [*] Import block is un-sorted or un-formatted
tardis/model/geometry/radial1d.py:196:29: UP004 [*] Class `NumbaRadial1DGeometry` inherits from `object`
tardis/model/geometry/tests/test_radial1d.py:1:1: INP001 File `tardis/model/geometry/tests/test_radial1d.py` is part of an implicit namespace package. Add an `__init__.py`.
tardis/model/geometry/tests/test_radial1d.py:1:1: I001 [*] Import block is un-sorted or un-formatted
tardis/model/matter/__init__.py:1:45: F401 `tardis.model.matter.composition.Composition` imported but unused; consider removing, adding to `__all__`, or using a redundant alias
tardis/model/matter/composition.py:206:9: RET505 Unnecessary `else` after `return` statement
tardis/model/matter/decay.py:20:14: UP008 Use `super()` instead of `super(__class__, self)`
tardis/model/matter/decay.py:28:28: C408 Unnecessary `dict` call (rewrite as a literal)
tardis/model/matter/decay.py:36:30: C405 Unnecessary `list` literal (rewrite as a `set` literal)
tardis/model/matter/decay.py:71:23: C408 Unnecessary `dict` call (rewrite as a literal)
tardis/model/matter/decay.py:101:21: G004 Logging statement uses f-string
tardis/model/matter/decay.py:104:17: G004 Logging statement uses f-string
tardis/model/tests/test_base.py:1:1: I001 [*] Import block is un-sorted or un-formatted
tardis/model/tests/test_base.py:1:8: F401 [*] `os` imported but unused
tardis/model/tests/test_base.py:2:21: F401 [*] `pathlib.Path` imported but unused
tardis/model/tests/test_csvy_model.py:1:1: I001 [*] Import block is un-sorted or un-formatted
tardis/model/tests/test_csvy_model.py:1:21: F401 [*] `pathlib.Path` imported but unused
tardis/model/tests/test_csvy_model.py:6:30: F401 [*] `astropy.units` imported but unused
tardis/model/tests/test_csvy_model.py:8:38: F401 [*] `tardis.io.atom_data.base.AtomData` imported but unused
tardis/model/tests/test_density.py:1:1: I001 [*] Import block is un-sorted or un-formatted
tardis/model/tests/test_density.py:1:8: F401 [*] `os` imported but unused
tardis/opacities/macro_atom/base.py:22:14: UP008 Use `super()` instead of `super(__class__, self)`
tardis/opacities/macro_atom/base.py:133:9: E722 Do not use bare `except`
tardis/opacities/macro_atom/util.py:4:33: F401 [*] `tardis.constants` imported but unused
tardis/opacities/tau_sobolev.py:92:14: UP008 Use `super()` instead of `super(__class__, self)`
tardis/plasma/__init__.py:2:63: W291 Trailing whitespace
tardis/plasma/__init__.py:5:32: F401 `tardis.plasma.base.BasePlasma` imported but unused; consider removing, adding to `__all__`, or using a redundant alias
tardis/plasma/base.py:1:1: I001 [*] Import block is un-sorted or un-formatted
tardis/plasma/base.py:1:8: F401 [*] `os` imported but unused
tardis/plasma/base.py:10:1: F403 `from tardis.plasma.properties.base import *` used; unable to detect undefined names
tardis/plasma/base.py:33:9: RET505 Unnecessary `else` after `return` statement
tardis/plasma/base.py:34:18: UP008 Use `super()` instead of `super(__class__, self)`
tardis/plasma/base.py:41:9: RET506 Unnecessary `else` after `raise` statement
tardis/plasma/base.py:42:18: UP008 Use `super()` instead of `super(__class__, self)`
tardis/plasma/base.py:60:9: D202 [*] No blank lines allowed after function docstring (found 1)
tardis/plasma/base.py:100:17: E722 Do not use bare `except`
tardis/plasma/base.py:133:44: F405 `PreviousIterationProperty` may be undefined, or defined from star imports
tardis/plasma/base.py:142:46: F405 `Input` may be undefined, or defined from star imports
tardis/plasma/base.py:203:21: UP030 Use implicit references for positional format fields
tardis/plasma/base.py:203:21: UP032 [*] Use f-string instead of `format` call
tardis/plasma/base.py:227:21: UP030 Use implicit references for positional format fields
tardis/plasma/base.py:227:21: UP032 [*] Use f-string instead of `format` call
tardis/plasma/base.py:237:9: D202 [*] No blank lines allowed after function docstring (found 1)
tardis/plasma/base.py:265:13: G004 Logging statement uses f-string
tardis/plasma/base.py:272:9: D202 [*] No blank lines allowed after function docstring (found 1)
tardis/plasma/base.py:289:20: F401 [*] `pygraphviz` imported but unused
tardis/plasma/base.py:290:9: E722 Do not use bare `except`
tardis/plasma/base.py:291:20: G010 [*] Logging statement uses `warn` instead of `warning`
tardis/plasma/base.py:299:16: E712 Avoid equality comparisons to `True`; use `if latex_label:` for truth checks
tardis/plasma/base.py:306:41: PIE808 [*] Unnecessary `start` argument in `range`
tardis/plasma/base.py:320:16: E712 Avoid equality comparisons to `True`; use `if latex_label:` for truth checks
tardis/plasma/base.py:326:16: E712 Avoid equality comparisons to `True`; use `if latex_label:` for truth checks
tardis/plasma/base.py:344:18: UP015 [*] Unnecessary open mode parameters
tardis/plasma/base.py:376:9: E722 Do not use bare `except`
tardis/plasma/base.py:377:20: G010 [*] Logging statement uses `warn` instead of `warning`
tardis/plasma/base.py:386:14: UP015 [*] Unnecessary open mode parameters
tardis/plasma/base.py:422:35: F405 `HiddenPlasmaProperty` may be undefined, or defined from star imports
tardis/plasma/base.py:440:29: E722 Do not use bare `except`
tardis/plasma/properties/__init__.py:8:1: F403 `from tardis.opacities.macro_atom.transition_probabilities import *` used; unable to detect undefined names
tardis/plasma/properties/__init__.py:9:1: F403 `from tardis.plasma.properties.atomic import *` used; unable to detect undefined names
tardis/plasma/properties/__init__.py:10:1: F403 `from tardis.plasma.properties.continuum_processes import *` used; unable to detect undefined names
tardis/plasma/properties/__init__.py:11:1: F403 `from tardis.plasma.properties.general import *` used; unable to detect undefined names
tardis/plasma/properties/__init__.py:12:1: F403 `from tardis.plasma.properties.helium_nlte import *` used; unable to detect undefined names
tardis/plasma/properties/__init__.py:13:1: F403 `from tardis.plasma.properties.ion_population import *` used; unable to detect undefined names
tardis/plasma/properties/__init__.py:14:1: F403 `from tardis.plasma.properties.j_blues import *` used; unable to detect undefined names
tardis/plasma/properties/__init__.py:15:1: F403 `from tardis.plasma.properties.level_population import *` used; unable to detect undefined names
tardis/plasma/properties/__init__.py:16:1: F403 `from tardis.plasma.properties.nlte import *` used; unable to detect undefined names
tardis/plasma/properties/__init__.py:17:1: F403 `from tardis.plasma.properties.nlte_rate_equation_solver import *` used; unable to detect undefined names
tardis/plasma/properties/__init__.py:18:1: F403 `from tardis.plasma.properties.partition_function import *` used; unable to detect undefined names
tardis/plasma/properties/__init__.py:19:1: F403 `from tardis.plasma.properties.plasma_input import *` used; unable to detect undefined names
tardis/plasma/properties/__init__.py:20:1: F403 `from tardis.plasma.properties.radiative_properties import *` used; unable to detect undefined names
tardis/plasma/properties/__init__.py:21:1: F403 `from tardis.plasma.properties.rate_matrix_index import *` used; unable to detect undefined names
tardis/plasma/properties/atomic.py:6:28: F401 [*] `radioactivedecay` imported but unused
tardis/plasma/properties/atomic.py:11:33: F401 [*] `tardis.constants` imported but unused
tardis/plasma/properties/atomic.py:379:17: UP032 [*] Use f-string instead of `format` call
tardis/plasma/properties/atomic.py:558:9: RET505 Unnecessary `else` after `return` statement
tardis/plasma/properties/atomic.py:589:9: RET505 Unnecessary `else` after `return` statement
tardis/plasma/properties/atomic.py:602:17: G004 Logging statement uses f-string
tardis/plasma/properties/atomic.py:643:9: RET505 Unnecessary `else` after `return` statement
tardis/plasma/properties/base.py:78:14: UP008 Use `super()` instead of `super(__class__, self)`
tardis/plasma/properties/base.py:117:25: G004 Logging statement uses f-string
tardis/plasma/properties/base.py:135:14: UP008 Use `super()` instead of `super(__class__, self)`
tardis/plasma/properties/base.py:163:14: UP008 Use `super()` instead of `super(__class__, self)`
tardis/plasma/properties/base.py:178:9: RET505 Unnecessary `else` after `return` statement
tardis/plasma/properties/continuum_processes.py:1:1: I001 [*] Import block is un-sorted or un-formatted
tardis/plasma/properties/general.py:35:14: UP008 Use `super()` instead of `super(__class__, self)`
tardis/plasma/properties/general.py:76:21: UP008 Use `super()` instead of `super(__class__, self)`
tardis/plasma/properties/general.py:120:14: UP008 Use `super()` instead of `super(__class__, self)`
tardis/plasma/properties/helium_nlte.py:51:13: UP034 [*] Avoid extraneous parentheses
tardis/plasma/properties/helium_nlte.py:126:14: UP008 Use `super()` instead of `super(__class__, self)`
tardis/plasma/properties/helium_nlte.py:178:21: E722 Do not use bare `except`
tardis/plasma/properties/helium_nlte.py:181:29: G004 Logging statement uses f-string
tardis/plasma/properties/helium_nlte.py:214:23: S605 Starting a process with a shell: seems safe, but may be changed in the future; consider rewriting without `shell`
tardis/plasma/properties/helium_nlte.py:231:18: UP015 [*] Unnecessary open mode parameters
tardis/plasma/properties/helium_nlte.py:234:36: PIE808 [*] Unnecessary `start` argument in `range`
tardis/plasma/properties/helium_nlte.py:257:69: F821 Undefined name `s1`
tardis/plasma/properties/ion_population.py:204:14: UP008 Use `super()` instead of `super(__class__, self)`
tardis/plasma/properties/ion_population.py:287:14: UP008 Use `super()` instead of `super(__class__, self)`
tardis/plasma/properties/ion_population.py:366:25: G004 Logging statement uses f-string
tardis/plasma/properties/ion_population.py:420:14: UP008 Use `super()` instead of `super(__class__, self)`
tardis/plasma/properties/ion_population.py:487:25: G004 Logging statement uses f-string
tardis/plasma/properties/j_blues.py:50:14: UP008 Use `super()` instead of `super(__class__, self)`
tardis/plasma/properties/j_blues.py:59:9: RET505 Unnecessary `else` after `return` statement
tardis/plasma/properties/level_population.py:1:1: I001 [*] Import block is un-sorted or un-formatted
tardis/plasma/properties/level_population.py:28:14: UP008 Use `super()` instead of `super(__class__, self)`
tardis/plasma/properties/nlte.py:2:8: F401 [*] `os` imported but unused
tardis/plasma/properties/nlte.py:4:17: F401 [*] `numpy` imported but unused
tardis/plasma/properties/nlte.py:10:53: F401 [*] `tardis.plasma.properties.ion_population.PhiSahaNebular` imported but unused
tardis/plasma/properties/nlte_excitation_data.py:8:26: UP004 [*] Class `NLTEExcitationData` inherits from `object`
tardis/plasma/properties/nlte_rate_equation_solver.py:302:25: UP032 [*] Use f-string instead of `format` call
tardis/plasma/properties/nlte_rate_equation_solver.py:302:25: G001 Logging statement uses `str.format`
tardis/plasma/properties/nlte_rate_equation_solver.py:311:25: G004 Logging statement uses f-string
tardis/plasma/properties/partition_function.py:1:1: I001 [*] Import block is un-sorted or un-formatted
tardis/plasma/properties/partition_function.py:145:9: RET505 Unnecessary `elif` after `return` statement
tardis/plasma/properties/partition_function.py:161:14: UP008 Use `super()` instead of `super(__class__, self)`
tardis/plasma/properties/partition_function.py:181:25: G004 Logging statement uses f-string
tardis/plasma/properties/partition_function.py:192:21: G004 Logging statement uses f-string
tardis/plasma/properties/partition_function.py:199:21: G004 Logging statement uses f-string
tardis/plasma/properties/partition_function.py:252:21: RET506 Unnecessary `else` after `raise` statement
tardis/plasma/properties/partition_function.py:395:21: UP008 Use `super()` instead of `super(__class__, self)`
tardis/plasma/properties/property_collections.py:6:1: F403 `from tardis.plasma.properties import *` used; unable to detect undefined names
tardis/plasma/properties/property_collections.py:15:9: F405 `DilutePlanckianRadField` may be undefined, or defined from star imports
tardis/plasma/properties/property_collections.py:16:9: F405 `Abundance` may be undefined, or defined from star imports
tardis/plasma/properties/property_collections.py:17:9: F405 `NumberDensity` may be undefined, or defined from star imports
tardis/plasma/properties/property_collections.py:18:9: F405 `TimeExplosion` may be undefined, or defined from star imports
tardis/plasma/properties/property_collections.py:19:9: F405 `AtomicData` may be undefined, or defined from star imports
tardis/plasma/properties/property_collections.py:20:9: F405 `TRadiative` may be undefined, or defined from star imports
tardis/plasma/properties/property_collections.py:21:9: F405 `DilutionFactor` may be undefined, or defined from star imports
tardis/plasma/properties/property_collections.py:22:9: F405 `LinkTRadTElectron` may be undefined, or defined from star imports
tardis/plasma/properties/property_collections.py:23:9: F405 `HeliumTreatment` may be undefined, or defined from star imports
tardis/plasma/properties/property_collections.py:24:9: F405 `ContinuumInteractionSpecies` may be undefined, or defined from star imports
tardis/plasma/properties/property_collections.py:25:9: F405 `NLTEIonizationSpecies` may be undefined, or defined from star imports
tardis/plasma/properties/property_collections.py:26:9: F405 `NLTEExcitationSpecies` may be undefined, or defined from star imports
tardis/plasma/properties/property_collections.py:31:9: F405 `BetaRadiation` may be undefined, or defined from star imports
tardis/plasma/properties/property_collections.py:32:9: F405 `Levels` may be undefined, or defined from star imports
tardis/plasma/properties/property_collections.py:33:9: F405 `Lines` may be undefined, or defined from star imports
tardis/plasma/properties/property_collections.py:34:9: F405 `PartitionFunction` may be undefined, or defined from star imports
tardis/plasma/properties/property_collections.py:35:9: F405 `GElectron` may be undefined, or defined from star imports
tardis/plasma/properties/property_collections.py:36:9: F405 `IonizationData` may be undefined, or defined from star imports
tardis/plasma/properties/property_collections.py:37:9: F405 `LinesLowerLevelIndex` may be undefined, or defined from star imports
tardis/plasma/properties/property_collections.py:38:9: F405 `LinesUpperLevelIndex` may be undefined, or defined from star imports
tardis/plasma/properties/property_collections.py:40:9: F405 `StimulatedEmissionFactor` may be undefined, or defined from star imports
tardis/plasma/properties/property_collections.py:41:9: F405 `SelectedAtoms` may be undefined, or defined from star imports
tardis/plasma/properties/property_collections.py:42:9: F405 `ElectronTemperature` may be undefined, or defined from star imports
tardis/plasma/properties/property_collections.py:45:55: F405 `PhiSahaLTE` may be undefined, or defined from star imports
tardis/plasma/properties/property_collections.py:46:55: F405 `LevelBoltzmannFactorLTE` may be undefined, or defined from star imports
tardis/plasma/properties/property_collections.py:48:6: F405 `BetaSobolev` may be undefined, or defined from star imports
tardis/plasma/properties/property_collections.py:48:44: F405 `MacroAtomData` may be undefined, or defined from star imports
tardis/plasma/properties/property_collections.py:51:6: F405 `PhiSahaNebular` may be undefined, or defined from star imports
tardis/plasma/properties/property_collections.py:51:22: F405 `ZetaData` may be undefined, or defined from star imports
tardis/plasma/properties/property_collections.py:51:32: F405 `BetaElectron` may be undefined, or defined from star imports
tardis/plasma/properties/property_collections.py:51:46: F405 `RadiationFieldCorrection` may be undefined, or defined from star imports
tardis/plasma/properties/property_collections.py:54:6: F405 `LevelBoltzmannFactorDiluteLTE` may be undefined, or defined from star imports
tardis/plasma/properties/property_collections.py:56:49: F405 `LevelBoltzmannFactorNoNLTE` may be undefined, or defined from star imports
tardis/plasma/properties/property_collections.py:59:9: F405 `LevelBoltzmannFactorNLTE` may be undefined, or defined from star imports
tardis/plasma/properties/property_collections.py:60:9: F405 `NLTEData` may be undefined, or defined from star imports
tardis/plasma/properties/property_collections.py:61:9: F405 `PreviousElectronDensities` may be undefined, or defined from star imports
tardis/plasma/properties/property_collections.py:62:9: F405 `PreviousBetaSobolev` may be undefined, or defined from star imports
tardis/plasma/properties/property_collections.py:63:9: F405 `BetaSobolev` may be undefined, or defined from star imports
tardis/plasma/properties/property_collections.py:67:6: F405 `NLTEIndexHelper` may be undefined, or defined from star imports
tardis/plasma/properties/property_collections.py:67:23: F405 `NLTEPopulationSolverRoot` may be undefined, or defined from star imports
tardis/plasma/properties/property_collections.py:70:6: F405 `NLTEIndexHelper` may be undefined, or defined from star imports
tardis/plasma/properties/property_collections.py:70:23: F405 `NLTEPopulationSolverLU` may be undefined, or defined from star imports
tardis/plasma/properties/property_collections.py:74:9: F405 `HeliumNLTE` may be undefined, or defined from star imports
tardis/plasma/properties/property_collections.py:75:9: F405 `RadiationFieldCorrection` may be undefined, or defined from star imports
tardis/plasma/properties/property_collections.py:76:9: F405 `ZetaData` may be undefined, or defined from star imports
tardis/plasma/properties/property_collections.py:77:9: F405 `BetaElectron` may be undefined, or defined from star imports
tardis/plasma/properties/property_collections.py:78:9: F405 `LevelNumberDensityHeNLTE` may be undefined, or defined from star imports
tardis/plasma/properties/property_collections.py:79:9: F405 `IonNumberDensityHeNLTE` may be undefined, or defined from star imports
tardis/plasma/properties/property_collections.py:83:6: F405 `LevelNumberDensity` may be undefined, or defined from star imports
tardis/plasma/properties/property_collections.py:83:26: F405 `IonNumberDensity` may be undefined, or defined from star imports
tardis/plasma/properties/property_collections.py:86:6: F405 `HeliumNumericalNLTE` may be undefined, or defined from star imports
tardis/plasma/properties/property_collections.py:89:6: F405 `JBluesEstimator` may be undefined, or defined from star imports
tardis/plasma/properties/property_collections.py:89:23: F405 `RInner` may be undefined, or defined from star imports
tardis/plasma/properties/property_collections.py:89:31: F405 `TInner` may be undefined, or defined from star imports
tardis/plasma/properties/property_collections.py:89:39: F405 `Volume` may be undefined, or defined from star imports
tardis/plasma/properties/property_collections.py:92:6: F405 `JBluesDetailed` may be undefined, or defined from star imports
tardis/plasma/properties/property_collections.py:92:22: F405 `JBluesNormFactor` may be undefined, or defined from star imports
tardis/plasma/properties/property_collections.py:92:40: F405 `LuminosityInner` may be undefined, or defined from star imports
tardis/plasma/properties/property_collections.py:92:57: F405 `TimeSimulation` may be undefined, or defined from star imports
tardis/plasma/properties/property_collections.py:96:9: F405 `StimRecombRateCoeffEstimator` may be undefined, or defined from star imports
tardis/plasma/properties/property_collections.py:97:9: F405 `PhotoIonRateCoeffEstimator` may be undefined, or defined from star imports
tardis/plasma/properties/property_collections.py:98:9: F405 `RInner` may be undefined, or defined from star imports
tardis/plasma/properties/property_collections.py:99:9: F405 `TInner` may be undefined, or defined from star imports
tardis/plasma/properties/property_collections.py:100:9: F405 `Volume` may be undefined, or defined from star imports
tardis/plasma/properties/property_collections.py:101:9: F405 `BfHeatingRateCoeffEstimator` may be undefined, or defined from star imports
tardis/plasma/properties/property_collections.py:102:9: F405 `StimRecombCoolingRateCoeffEstimator` may be undefined, or defined from star imports
tardis/plasma/properties/property_collections.py:103:9: F405 `YgData` may be undefined, or defined from star imports
tardis/plasma/properties/property_collections.py:108:9: F405 `PhotoIonizationData` may be undefined, or defined from star imports
tardis/plasma/properties/property_collections.py:109:9: F405 `SpontRecombRateCoeff` may be undefined, or defined from star imports
tardis/plasma/properties/property_collections.py:110:9: F405 `PhotoIonRateCoeff` may be undefined, or defined from star imports
tardis/plasma/properties/property_collections.py:111:9: F405 `ThermalLevelBoltzmannFactorLTE` may be undefined, or defined from star imports
tardis/plasma/properties/property_collections.py:112:9: F405 `ThermalLTEPartitionFunction` may be undefined, or defined from star imports
tardis/plasma/properties/property_collections.py:113:9: F405 `BetaElectron` may be undefined, or defined from star imports
tardis/plasma/properties/property_collections.py:114:9: F405 `ThermalGElectron` may be undefined, or defined from star imports
tardis/plasma/properties/property_collections.py:115:9: F405 `ThermalPhiSahaLTE` may be undefined, or defined from star imports
tardis/plasma/properties/property_collections.py:116:9: F405 `SahaFactor` may be undefined, or defined from star imports
tardis/plasma/properties/property_collections.py:117:9: F405 `TimeSimulation` may be undefined, or defined from star imports
tardis/plasma/properties/property_collections.py:118:9: F405 `PhotoIonEstimatorsNormFactor` may be undefined, or defined from star imports
tardis/plasma/properties/property_collections.py:119:9: F405 `LuminosityInner` may be undefined, or defined from star imports
tardis/plasma/properties/property_collections.py:120:9: F405 `StimRecombRateCoeff` may be undefined, or defined from star imports
tardis/plasma/properties/property_collections.py:121:9: F405 `CorrPhotoIonRateCoeff` may be undefined, or defined from star imports
tardis/plasma/properties/property_collections.py:122:9: F405 `SpontRecombCoolingRateCoeff` may be undefined, or defined from star imports
tardis/plasma/properties/property_collections.py:123:9: F405 `RawRecombTransProbs` may be undefined, or defined from star imports
tardis/plasma/properties/property_collections.py:124:9: F405 `RawPhotoIonTransProbs` may be undefined, or defined from star imports
tardis/plasma/properties/property_collections.py:125:9: F405 `RawRadBoundBoundTransProbs` may be undefined, or defined from star imports
tardis/plasma/properties/property_collections.py:126:9: F405 `MarkovChainTransProbs` may be undefined, or defined from star imports
tardis/plasma/properties/property_collections.py:127:9: F405 `NonContinuumTransProbsMask` may be undefined, or defined from star imports
tardis/plasma/properties/property_collections.py:128:9: F405 `YgInterpolator` may be undefined, or defined from star imports
tardis/plasma/properties/property_collections.py:129:9: F405 `CollExcRateCoeff` may be undefined, or defined from star imports
tardis/plasma/properties/property_collections.py:130:9: F405 `CollDeexcRateCoeff` may be undefined, or defined from star imports
tardis/plasma/properties/property_collections.py:131:9: F405 `RawCollisionTransProbs` may be undefined, or defined from star imports
tardis/plasma/properties/property_collections.py:132:9: F405 `MarkovChainIndex` may be undefined, or defined from star imports
tardis/plasma/properties/property_collections.py:133:9: F405 `MarkovChainTransProbsCollector` may be undefined, or defined from star imports
tardis/plasma/properties/property_collections.py:135:9: F405 `MonteCarloTransProbs` may be undefined, or defined from star imports
tardis/plasma/properties/property_collections.py:136:9: F405 `FreeFreeCoolingRate` may be undefined, or defined from star imports
tardis/plasma/properties/property_collections.py:137:9: F405 `FreeBoundCoolingRate` may be undefined, or defined from star imports
tardis/plasma/properties/property_collections.py:138:9: F405 `BoundFreeOpacity` may be undefined, or defined from star imports
tardis/plasma/properties/property_collections.py:139:9: F405 `LevelNumberDensityLTE` may be undefined, or defined from star imports
tardis/plasma/properties/property_collections.py:140:9: F405 `PhotoIonBoltzmannFactor` may be undefined, or defined from star imports
tardis/plasma/properties/property_collections.py:141:9: F405 `FreeBoundEmissionCDF` may be undefined, or defined from star imports
tardis/plasma/properties/property_collections.py:142:9: F405 `LevelIdxs2LineIdx` may be undefined, or defined from star imports
tardis/plasma/properties/property_collections.py:143:9: F405 `LevelIdxs2TransitionIdx` may be undefined, or defined from star imports
tardis/plasma/properties/property_collections.py:144:9: F405 `CollIonRateCoeffSeaton` may be undefined, or defined from star imports
tardis/plasma/properties/property_collections.py:145:9: F405 `CollRecombRateCoeff` may be undefined, or defined from star imports
tardis/plasma/properties/property_collections.py:146:9: F405 `RawCollIonTransProbs` may be undefined, or defined from star imports
tardis/plasma/properties/property_collections.py:147:9: F405 `ContinuumInteractionHandler` may be undefined, or defined from star imports
tardis/plasma/properties/property_collections.py:148:9: F405 `BetaSobolev` may be undefined, or defined from star imports
tardis/plasma/properties/property_collections.py:151:58: F405 `AdiabaticCoolingRate` may be undefined, or defined from star imports
tardis/plasma/properties/property_collections.py:154:9: F405 `RawTwoPhotonTransProbs` may be undefined, or defined from star imports
tardis/plasma/properties/property_collections.py:155:9: F405 `TwoPhotonData` may be undefined, or defined from star imports
tardis/plasma/properties/property_collections.py:156:9: F405 `TwoPhotonEmissionCDF` may be undefined, or defined from star imports
tardis/plasma/properties/property_collections.py:157:9: F405 `TwoPhotonFrequencySampler` may be undefined, or defined from star imports
tardis/plasma/properties/radiative_properties.py:40:14: UP008 Use `super()` instead of `super(__class__, self)`
tardis/plasma/properties/radiative_properties.py:176:14: UP008 Use `super()` instead of `super(__class__, self)`
tardis/plasma/properties/rate_matrix_index.py:1:1: I001 [*] Import block is un-sorted or un-formatted
tardis/plasma/radiation_field/__init__.py:2:5: F401 `tardis.plasma.radiation_field.planck_rad_field.DilutePlanckianRadiationField` imported but unused; consider removing, adding to `__all__`, or using a redundant alias
tardis/plasma/radiation_field/planck_rad_field.py:58:44: FA100 Add `from __future__ import annotations` to simplify `typing.Union`
tardis/plasma/standard_plasmas.py:290:9: RET506 Unnecessary `else` after `raise` statement
tardis/plasma/tests/test_complete_plasmas.py:147:27: FLY002 Consider `f"{hash_string}_{prop}"` instead of string join
tardis/plasma/tests/test_complete_plasmas.py:152:39: FLY002 Consider `f"{hash_string}_{nlte_prop}"` instead of string join
tardis/plasma/tests/test_hdf_plasma.py:1:17: F401 [*] `numpy` imported but unused
tardis/plasma/tests/test_nlte_excitation.py:1:1: I001 [*] Import block is un-sorted or un-formatted
tardis/plasma/tests/test_nlte_excitation.py:5:27: F401 [*] `numpy.testing.assert_allclose` imported but unused
tardis/plasma/tests/test_nlte_solver.py:1:1: I001 [*] Import block is un-sorted or un-formatted
tardis/plasma/tests/test_nlte_solver.py:5:25: F811 [*] Redefinition of unused `npt` from line 2
tardis/plasma/tests/test_plasma_continuum.py:1:1: I001 [*] Import block is un-sorted or un-formatted
tardis/radiation_field/base.py:1:1: INP001 File `tardis/radiation_field/base.py` is part of an implicit namespace package. Add an `__init__.py`.
tardis/radiation_field/base.py:1:1: I001 [*] Import block is un-sorted or un-formatted
tardis/scripts/cmfgen2tardis.py:1:1: I001 [*] Import block is un-sorted or un-formatted
tardis/scripts/cmfgen2tardis.py:2:8: F401 [*] `sys` imported but unused
tardis/scripts/cmfgen2tardis.py:7:33: F401 [*] `tardis.io.atom_data.AtomData` imported but unused
tardis/scripts/cmfgen2tardis.py:15:27: F821 Undefined name `atomic_dataset`
tardis/scripts/cmfgen2tardis.py:43:10: UP015 [*] Unnecessary open mode parameters
tardis/scripts/cmfgen2tardis.py:70:34: F821 Undefined name `atomic_dataset`
tardis/scripts/cmfgen2tardis.py:105:18: FLY002 Consider `f"{filename}.csv"` instead of string join
tardis/scripts/debug/run_numba_single.py:1:1: INP001 File `tardis/scripts/debug/run_numba_single.py` is part of an implicit namespace package. Add an `__init__.py`.
tardis/simulation/__init__.py:5:36: F401 `tardis.simulation.base.Simulation` imported but unused; consider removing, adding to `__all__`, or using a redundant alias
tardis/simulation/base.py:142:14: UP008 Use `super()` instead of `super(__class__, self)`
tardis/simulation/base.py:184:13: RET506 Unnecessary `else` after `raise` statement
tardis/simulation/base.py:248:17: G004 Logging statement uses f-string
tardis/simulation/base.py:255:9: RET505 Unnecessary `else` after `return` statement
tardis/simulation/base.py:377:13: G004 Logging statement uses f-string
tardis/simulation/base.py:459:13: G004 Logging statement uses f-string
tardis/simulation/base.py:560:25: G004 Logging statement uses f-string
tardis/simulation/base.py:563:13: G004 Logging statement uses f-string
tardis/simulation/base.py:568:13: G004 Logging statement uses f-string
tardis/simulation/base.py:619:13: TRY300 Consider moving this statement to an `else` block
tardis/simulation/base.py:621:26: G004 Logging statement uses f-string
tardis/simulation/tests/test_simulation.py:1:1: I001 [*] Import block is un-sorted or un-formatted
tardis/simulation/tests/test_simulation.py:1:8: F401 [*] `os` imported but unused
tardis/simulation/tests/test_simulation.py:6:8: F401 [*] `logging` imported but unused
tardis/simulation/tests/test_simulation.py:10:20: F401 [*] `tardis.run_tardis` imported but unused
tardis/simulation/tests/test_simulation.py:50:5: RET505 Unnecessary `else` after `return` statement
tardis/spectrum/formal_integral.py:1:1: I001 [*] Import block is un-sorted or un-formatted
tardis/spectrum/formal_integral.py:9:25: F401 [*] `numba.char` imported but unused
tardis/spectrum/formal_integral.py:9:31: F401 [*] `numba.float64` imported but unused
tardis/spectrum/formal_integral.py:9:40: F401 [*] `numba.int64` imported but unused
tardis/spectrum/formal_integral.py:9:47: F401 [*] `numba.typeof` imported but unused
tardis/spectrum/formal_integral.py:9:55: F401 [*] `numba.byte` imported but unused
tardis/spectrum/formal_integral.py:10:32: F401 [*] `numba.experimental.jitclass` imported but unused
tardis/spectrum/formal_integral.py:21:5: F811 Redefinition of unused `opacity_state_initialize` from line 15
tardis/spectrum/formal_integral.py:22:5: F811 Redefinition of unused `OpacityState` from line 14
tardis/spectrum/formal_integral.py:22:5: F401 [*] `tardis.transport.montecarlo.numba_interface.OpacityState` imported but unused
tardis/spectrum/formal_integral.py:55:5: D202 [*] No blank lines allowed after function docstring (found 1)
tardis/spectrum/formal_integral.py:65:7: TD006 [*] Invalid TODO capitalization: `todo` should be `TODO`
tardis/spectrum/formal_integral.py:218:29: UP004 [*] Class `NumbaFormalIntegrator` inherits from `object`
tardis/spectrum/formal_integral.py:261:24: UP004 [*] Class `FormalIntegrator` inherits from `object`
tardis/spectrum/formal_integral.py:299:9: D209 [*] Multi-line docstring closing quotes should be on a separate line
tardis/spectrum/formal_integral.py:344:13: RET506 Unnecessary `else` after `raise` statement
tardis/spectrum/formal_integral.py:356:16: E713 [*] Test for membership should be `not in`
tardis/spectrum/formal_integral.py:615:9: D209 [*] Multi-line docstring closing quotes should be on a separate line
tardis/spectrum/formal_integral.py:684:5: RET505 Unnecessary `else` after `return` statement
tardis/spectrum/formal_integral.py:720:5: RET505 Unnecessary `else` after `return` statement
tardis/spectrum/formal_integral_cuda.py:1:1: I001 [*] Import block is un-sorted or un-formatted
tardis/spectrum/formal_integral_cuda.py:1:8: F401 [*] `sys` imported but unused
tardis/spectrum/formal_integral_cuda.py:3:30: F401 [*] `astropy.units` imported but unused
tardis/spectrum/formal_integral_cuda.py:4:19: F401 [*] `numba.float64` imported but unused
tardis/spectrum/formal_integral_cuda.py:4:28: F401 [*] `numba.int64` imported but unused
tardis/spectrum/formal_integral_cuda.py:17:5: D202 [*] No blank lines allowed after function docstring (found 1)
tardis/spectrum/formal_integral_cuda.py:58:5: D202 [*] No blank lines allowed after function docstring (found 1)
tardis/spectrum/formal_integral_cuda.py:96:10: W605 [*] Invalid escape sequence: `\e`
tardis/spectrum/formal_integral_cuda.py:237:28: UP004 [*] Class `CudaFormalIntegrator` inherits from `object`
tardis/spectrum/formal_integral_cuda.py:378:5: RET505 Unnecessary `else` after `return` statement
tardis/spectrum/formal_integral_cuda.py:423:5: RET505 Unnecessary `else` after `return` statement
tardis/spectrum/formal_integral_cuda.py:433:5: PIE790 [*] Unnecessary `pass` statement
tardis/spectrum/formal_integral_cuda.py:513:5: D202 [*] No blank lines allowed after function docstring (found 1)
tardis/spectrum/formal_integral_cuda.py:555:5: D202 [*] No blank lines allowed after function docstring (found 1)
tardis/spectrum/tests/test_cuda_formal_integral.py:1:1: INP001 File `tardis/spectrum/tests/test_cuda_formal_integral.py` is part of an implicit namespace package. Add an `__init__.py`.
tardis/spectrum/tests/test_cuda_formal_integral.py:1:1: I001 [*] Import block is un-sorted or un-formatted
tardis/spectrum/tests/test_cuda_formal_integral.py:15:46: F401 [*] `tardis.transport.montecarlo.base.MonteCarloTransportSolver` imported but unused
tardis/spectrum/tests/test_numba_formal_integral.py:1:1: INP001 File `tardis/spectrum/tests/test_numba_formal_integral.py` is part of an implicit namespace package. Add an `__init__.py`.
tardis/spectrum/tests/test_numba_formal_integral.py:1:1: I001 [*] Import block is un-sorted or un-formatted
tardis/spectrum/tests/test_numba_formal_integral.py:5:18: F401 [*] `copy.deepcopy` imported but unused
tardis/spectrum/tests/test_spectrum.py:1:1: INP001 File `tardis/spectrum/tests/test_spectrum.py` is part of an implicit namespace package. Add an `__init__.py`.
tardis/spectrum/tests/test_spectrum.py:1:1: I001 [*] Import block is un-sorted or un-formatted
tardis/spectrum/tests/test_spectrum_solver.py:1:1: INP001 File `tardis/spectrum/tests/test_spectrum_solver.py` is part of an implicit namespace package. Add an `__init__.py`.
tardis/tests/fixtures/atom_data.py:1:1: I001 [*] Import block is un-sorted or un-formatted
tardis/tests/fixtures/atom_data.py:2:21: F401 [*] `pathlib.Path` imported but unused
tardis/tests/integration_tests/conftest.py:1:1: I001 [*] Import block is un-sorted or un-formatted
tardis/tests/integration_tests/conftest.py:42:13: F821 Undefined name `tardis_githash`
tardis/tests/integration_tests/conftest.py:87:5: RET505 Unnecessary `else` after `return` statement
tardis/tests/integration_tests/conftest.py:90:16: UP024 [*] Replace aliased errors with `OSError`
tardis/tests/integration_tests/conftest.py:91:19: UP024 [*] Replace aliased errors with `OSError`
tardis/tests/integration_tests/test_integration.py:1:1: I001 [*] Import block is un-sorted or un-formatted
tardis/tests/integration_tests/test_integration.py:5:8: ICN001 `matplotlib` should be imported as `mpl`
tardis/tests/integration_tests/test_integration.py:8:1: I001 [*] Import block is un-sorted or un-formatted
tardis/tests/integration_tests/test_integration.py:74:23: UP004 [*] Class `TestIntegration` inherits from `object`
tardis/tests/test_tardis_full_formal_integral.py:61:9: RET505 Unnecessary `else` after `return` statement
tardis/tests/test_util.py:1:1: I001 [*] Import block is un-sorted or un-formatted
tardis/tests/test_util.py:3:25: F401 [*] `numpy.testing` imported but unused
tardis/tests/test_util.py:15:5: F401 [*] `tardis.util.base.create_synpp_yaml` imported but unused
tardis/transport/frame_transformations.py:1:1: I001 [*] Import block is un-sorted or un-formatted
tardis/transport/frame_transformations.py:19:5: RET505 Unnecessary `else` after `return` statement
tardis/transport/frame_transformations.py:49:5: RET505 Unnecessary `else` after `return` statement
tardis/transport/geometry/calculate_distances.py:1:1: I001 [*] Import block is un-sorted or un-formatted
tardis/transport/geometry/calculate_distances.py:18:5: F401 [*] `tardis.transport.montecarlo.r_packet.print_r_packet_properties` imported but unused
tardis/transport/geometry/calculate_distances.py:24:5: D202 [*] No blank lines allowed after function docstring (found 1)
tardis/transport/geometry/calculate_distances.py:73:5: D202 [*] No blank lines allowed after function docstring (found 1)
tardis/transport/montecarlo/__init__.py:2:39: W291 Trailing whitespace
tardis/transport/montecarlo/__init__.py:6:69: W291 Trailing whitespace
tardis/transport/montecarlo/__init__.py:14:1: E402 Module level import not at top of file
tardis/transport/montecarlo/__init__.py:24:1: E402 Module level import not at top of file
tardis/transport/montecarlo/__init__.py:24:1: I001 [*] Import block is un-sorted or un-formatted
tardis/transport/montecarlo/__init__.py:24:50: F401 `tardis.transport.montecarlo.r_packet.RPacket` imported but unused; consider removing, adding to `__all__`, or using a redundant alias
tardis/transport/montecarlo/__init__.py:25:1: E402 Module level import not at top of file
tardis/transport/montecarlo/__init__.py:26:5: F401 `tardis.transport.montecarlo.packet_collections.PacketCollection` imported but unused; consider removing, adding to `__all__`, or using a redundant alias
tardis/transport/montecarlo/base.py:1:1: I001 [*] Import block is un-sorted or un-formatted
tardis/transport/montecarlo/configuration/base.py:1:1: I001 [*] Import block is un-sorted or un-formatted
tardis/transport/montecarlo/configuration/base.py:32:31: UP004 [*] Class `MonteCarloConfiguration` inherits from `object`
tardis/transport/montecarlo/estimators/continuum_radfield_properties.py:1:1: I001 [*] Import block is un-sorted or un-formatted
tardis/transport/montecarlo/estimators/radfield_estimator_calcs.py:1:1: I001 [*] Import block is un-sorted or un-formatted
tardis/transport/montecarlo/estimators/tests/test_continuum_property_solver.py:1:1: INP001 File `tardis/transport/montecarlo/estimators/tests/test_continuum_property_solver.py` is part of an implicit namespace package. Add an `__init__.py`.
tardis/transport/montecarlo/estimators/tests/test_continuum_property_solver.py:1:1: I001 [*] Import block is un-sorted or un-formatted
tardis/transport/montecarlo/estimators/tests/test_continuum_property_solver.py:3:25: F401 [*] `numpy.testing` imported but unused
tardis/transport/montecarlo/interaction.py:1:1: I001 [*] Import block is un-sorted or un-formatted
tardis/transport/montecarlo/macro_atom.py:1:1: I001 [*] Import block is un-sorted or un-formatted
tardis/transport/montecarlo/macro_atom.py:5:41: F401 [*] `tardis.transport.montecarlo.njit_dict` imported but unused
tardis/transport/montecarlo/montecarlo_main_loop.py:1:1: I001 [*] Import block is un-sorted or un-formatted
tardis/transport/montecarlo/montecarlo_main_loop.py:7:55: F401 [*] `tardis.transport.montecarlo.configuration.montecarlo_globals` imported but unused
tardis/transport/montecarlo/montecarlo_main_loop.py:13:8: PLW0406 Module `tardis.transport.montecarlo.montecarlo_main_loop` imports itself
tardis/transport/montecarlo/montecarlo_main_loop.py:13:60: F401 [*] `tardis.transport.montecarlo.montecarlo_main_loop` imported but unused
tardis/transport/montecarlo/montecarlo_transport_state.py:1:1: I001 [*] Import block is un-sorted or un-formatted
tardis/transport/montecarlo/montecarlo_transport_state.py:3:17: F401 [*] `numpy` imported but unused
tardis/transport/montecarlo/montecarlo_transport_state.py:10:45: F401 [*] `tardis.spectrum.formal_integral.IntegrationError` imported but unused
tardis/transport/montecarlo/montecarlo_transport_state.py:11:38: F401 [*] `tardis.spectrum.spectrum.TARDISSpectrum` imported but unused
tardis/transport/montecarlo/nonhomologous_grid.py:20:5: D409 [*] Section underline should match the length of its name ("Returns")
tardis/transport/montecarlo/nonhomologous_grid.py:36:5: D202 [*] No blank lines allowed after function docstring (found 1)
tardis/transport/montecarlo/nonhomologous_grid.py:40:5: D411 [*] Missing blank line before section ("Parameters")
tardis/transport/montecarlo/nonhomologous_grid.py:46:5: D409 [*] Section underline should match the length of its name ("Returns")
tardis/transport/montecarlo/nonhomologous_grid.py:64:5: D409 [*] Section underline should match the length of its name ("Parameters")
tardis/transport/montecarlo/nonhomologous_grid.py:67:5: D411 [*] Missing blank line before section ("Returns")
tardis/transport/montecarlo/nonhomologous_grid.py:68:5: D409 [*] Section underline should match the length of its name ("Returns")
tardis/transport/montecarlo/numba_interface.py:40:20: UP004 [*] Class `OpacityState` inherits from `object`
tardis/transport/montecarlo/numba_interface.py:66:9: D202 [*] No blank lines allowed after function docstring (found 1)
tardis/transport/montecarlo/numba_interface.py:121:5: D202 [*] No blank lines allowed after function docstring (found 1)
tardis/transport/montecarlo/packet_source.py:1:1: I001 [*] Import block is un-sorted or un-formatted
tardis/transport/montecarlo/packet_source.py:228:9: D202 [*] No blank lines allowed after function docstring (found 1)
tardis/transport/montecarlo/packet_source.py:229:50: W605 [*] Invalid escape sequence: `\m`
tardis/transport/montecarlo/packet_source.py:230:47: W605 [*] Invalid escape sequence: `\i`
tardis/transport/montecarlo/packet_source.py:246:9: RET505 Unnecessary `else` after `return` statement
tardis/transport/montecarlo/packet_source.py:270:9: D412 [*] No blank lines allowed between a section header and its content ("Parameters")
tardis/transport/montecarlo/packet_source.py:343:50: W605 [*] Invalid escape sequence: `\m`
tardis/transport/montecarlo/packet_source.py:343:54: W605 [*] Invalid escape sequence: `\p`
tardis/transport/montecarlo/packet_trackers.py:1:1: I001 [*] Import block is un-sorted or un-formatted
tardis/transport/montecarlo/packet_trackers.py:22:22: UP004 [*] Class `RPacketTracker` inherits from `object`
tardis/transport/montecarlo/packet_trackers.py:25:5: D411 [*] Missing blank line before section ("Parameters")
tardis/transport/montecarlo/packet_trackers.py:152:48: B009 [*] Do not call `getattr` with a constant attribute value. It is not any safer than normal property access.
tardis/transport/montecarlo/packet_trackers.py:172:37: UP004 [*] Class `RPacketLastInteractionTracker` inherits from `object`
tardis/transport/montecarlo/packet_trackers.py:175:5: D411 [*] Missing blank line before section ("Parameters")
tardis/transport/montecarlo/r_packet.py:1:1: I001 [*] Import block is un-sorted or un-formatted
tardis/transport/montecarlo/r_packet.py:4:18: F401 [*] `pandas` imported but unused
tardis/transport/montecarlo/r_packet.py:14:41: F811 [*] Redefinition of unused `njit_dict_no_parallel` from line 9
tardis/transport/montecarlo/r_packet.py:51:15: UP004 [*] Class `RPacket` inherits from `object`
tardis/transport/montecarlo/r_packet_transport.py:115:13: RET508 Unnecessary `elif` after `break` statement
tardis/transport/montecarlo/single_packet_loop.py:1:1: I001 [*] Import block is un-sorted or un-formatted
tardis/transport/montecarlo/tests/conftest.py:14:5: F811 Redefinition of unused `opacity_state_initialize` from line 7
tardis/transport/montecarlo/tests/test_base.py:1:1: I001 [*] Import block is un-sorted or un-formatted
tardis/transport/montecarlo/tests/test_base.py:1:8: F401 [*] `os` imported but unused
tardis/transport/montecarlo/tests/test_base.py:3:17: F401 [*] `numpy` imported but unused
tardis/transport/montecarlo/tests/test_base.py:5:30: F401 [*] `astropy.units` imported but unused
tardis/transport/montecarlo/tests/test_base.py:7:21: F401 [*] `pathlib.Path` imported but unused
tardis/transport/montecarlo/tests/test_interaction.py:1:1: I001 [*] Import block is un-sorted or un-formatted
tardis/transport/montecarlo/tests/test_macro_atom.py:1:1: I001 [*] Import block is un-sorted or un-formatted
tardis/transport/montecarlo/tests/test_macro_atom.py:3:17: F401 [*] `numpy` imported but unused
tardis/transport/montecarlo/tests/test_montecarlo.py:1:1: I001 [*] Import block is un-sorted or un-formatted
tardis/transport/montecarlo/tests/test_montecarlo.py:27:1: E402 Module level import not at top of file
tardis/transport/montecarlo/tests/test_montecarlo.py:32:1: E402 Module level import not at top of file
tardis/transport/montecarlo/tests/test_montecarlo.py:48:5: PT021 Use `yield` instead of `request.addfinalizer`
tardis/transport/montecarlo/tests/test_montecarlo.py:204:5: F811 Redefinition of unused `test_get_random_mu_different_output` from line 195
tardis/transport/montecarlo/tests/test_montecarlo.py:484:5: F821 Undefined name `mc`
tardis/transport/montecarlo/tests/test_montecarlo.py:570:5: F821 Undefined name `mc`
tardis/transport/montecarlo/tests/test_montecarlo.py:571:5: F821 Undefined name `mc`
tardis/transport/montecarlo/tests/test_montecarlo.py:579:5: F821 Undefined name `mc`
tardis/transport/montecarlo/tests/test_montecarlo.py:592:9: PT014 Duplicate of test case at index 1 in `@pytest_mark.parametrize`
tardis/transport/montecarlo/tests/test_montecarlo.py:597:5: F821 Undefined name `mc`
tardis/transport/montecarlo/tests/test_montecarlo.py:602:5: F821 Undefined name `mc`
tardis/transport/montecarlo/tests/test_montecarlo.py:625:9: F821 Undefined name `transport`
tardis/transport/montecarlo/tests/test_montecarlo.py:626:9: F821 Undefined name `transport`
tardis/transport/montecarlo/tests/test_montecarlo.py:627:9: F821 Undefined name `transport`
tardis/transport/montecarlo/tests/test_montecarlo.py:628:9: F821 Undefined name `transport`
tardis/transport/montecarlo/tests/test_montecarlo.py:630:5: F821 Undefined name `mc`
tardis/transport/montecarlo/tests/test_montecarlo.py:643:5: F821 Undefined name `mc`
tardis/transport/montecarlo/tests/test_montecarlo.py:667:5: F821 Undefined name `mc`
tardis/transport/montecarlo/tests/test_montecarlo.py:680:5: F821 Undefined name `mc`
tardis/transport/montecarlo/tests/test_montecarlo_main_loop.py:11:5: PT015 Assertion always fails, replace with `pytest.fail()`
tardis/transport/montecarlo/tests/test_montecarlo_main_loop.py:11:12: B011 Do not `assert False` (`python -O` removes these calls), raise `AssertionError()`
tardis/transport/montecarlo/tests/test_numba_interface.py:1:1: I001 [*] Import block is un-sorted or un-formatted
tardis/transport/montecarlo/tests/test_numba_interface.py:61:5: PT015 Assertion always fails, replace with `pytest.fail()`
tardis/transport/montecarlo/tests/test_numba_interface.py:61:12: B011 Do not `assert False` (`python -O` removes these calls), raise `AssertionError()`
tardis/transport/montecarlo/tests/test_packet.py:1:1: I001 [*] Import block is un-sorted or un-formatted
tardis/transport/montecarlo/tests/test_packet.py:8:38: F811 [*] Redefinition of unused `opacities` from line 4
tardis/transport/montecarlo/tests/test_packet.py:9:50: F811 [*] Redefinition of unused `frame_transformations` from line 5
tardis/transport/montecarlo/tests/test_packet.py:10:57: F811 [*] Redefinition of unused `calculate_distances` from line 6
tardis/transport/montecarlo/tests/test_packet.py:12:55: F401 [*] `tardis.transport.montecarlo.numba_interface` imported but unused
tardis/transport/montecarlo/tests/test_packet.py:15:50: F811 [*] Redefinition of unused `frame_transformations` from line 9
tardis/transport/montecarlo/tests/test_packet.py:16:57: F811 [*] Redefinition of unused `calculate_distances` from line 10
tardis/transport/montecarlo/tests/test_packet.py:27:1: E402 Module level import not at top of file
tardis/transport/montecarlo/tests/test_packet_source.py:1:1: I001 [*] Import block is un-sorted or un-formatted
tardis/transport/montecarlo/tests/test_packet_source.py:1:8: F401 [*] `os` imported but unused
tardis/transport/montecarlo/tests/test_packet_source.py:5:18: F401 [*] `pandas` imported but unused
tardis/transport/montecarlo/tests/test_packet_source.py:13:51: F401 [*] `tardis.tests.fixtures.regression_data.RegressionData` imported but unused
tardis/transport/montecarlo/tests/test_rpacket_last_interaction_tracker.py:1:1: I001 [*] Import block is un-sorted or un-formatted
tardis/transport/montecarlo/tests/test_rpacket_tracker.py:1:1: I001 [*] Import block is un-sorted or un-formatted
tardis/transport/montecarlo/tests/test_single_packet_loop.py:1:1: I001 [*] Import block is un-sorted or un-formatted
tardis/transport/montecarlo/tests/test_single_packet_loop.py:52:5: PT015 Assertion always fails, replace with `pytest.fail()`
tardis/transport/montecarlo/tests/test_single_packet_loop.py:52:12: B011 Do not `assert False` (`python -O` removes these calls), raise `AssertionError()`
tardis/transport/montecarlo/tests/test_single_packet_loop.py:57:5: PT015 Assertion always fails, replace with `pytest.fail()`
tardis/transport/montecarlo/tests/test_single_packet_loop.py:57:12: B011 Do not `assert False` (`python -O` removes these calls), raise `AssertionError()`
tardis/transport/montecarlo/tests/test_vpacket.py:1:1: I001 [*] Import block is un-sorted or un-formatted
tardis/transport/montecarlo/tests/test_vpacket.py:1:8: F401 [*] `os` imported but unused
tardis/transport/montecarlo/tests/test_vpacket.py:4:18: F401 [*] `pandas` imported but unused
tardis/transport/montecarlo/tests/test_vpacket.py:14:1: E402 Module level import not at top of file
tardis/transport/montecarlo/tests/test_weighted_packet_source.py:1:1: I001 [*] Import block is un-sorted or un-formatted
tardis/transport/montecarlo/tests/test_weighted_packet_source.py:1:8: F401 [*] `os` imported but unused
tardis/transport/montecarlo/tests/test_weighted_packet_source.py:4:17: F401 [*] `numpy` imported but unused
tardis/transport/montecarlo/tests/test_weighted_packet_source.py:5:18: F401 [*] `pandas` imported but unused
tardis/transport/montecarlo/tests/test_weighted_packet_source.py:12:51: F401 [*] `tardis.tests.fixtures.regression_data.RegressionData` imported but unused
tardis/transport/montecarlo/utils.py:1:1: I001 [*] Import block is un-sorted or un-formatted
tardis/transport/montecarlo/weighted_packet_source.py:1:1: I001 [*] Import block is un-sorted or un-formatted
tardis/transport/montecarlo/weighted_packet_source.py:1:19: F401 [*] `numexpr` imported but unused
tardis/transport/montecarlo/weighted_packet_source.py:2:17: F401 [*] `numpy` imported but unused
tardis/transport/montecarlo/weighted_packet_source.py:3:34: F401 [*] `astropy.constants` imported but unused
tardis/transport/montecarlo/weighted_packet_source.py:7:5: F401 [*] `tardis.transport.montecarlo.packet_source.BasePacketSource` imported but unused
tardis/transport/montecarlo/weighted_packet_source.py:8:5: F401 [*] `tardis.transport.montecarlo.packet_source.HDFWriterMixin` imported but unused
tardis/transport/montecarlo/weighted_packet_source.py:84:13: B018 Found useless expression. Either assign it to a variable or remove it.
tardis/transport/tests/test_doppler_factor.py:1:1: INP001 File `tardis/transport/tests/test_doppler_factor.py` is part of an implicit namespace package. Add an `__init__.py`.
tardis/transport/tests/test_doppler_factor.py:1:1: I001 [*] Import block is un-sorted or un-formatted
tardis/transport/tests/test_doppler_factor.py:2:17: F401 [*] `numpy` imported but unused
tardis/transport/tests/test_doppler_factor.py:5:48: F401 [*] `tardis.transport.montecarlo.r_packet` imported but unused
tardis/util/base.py:1:1: I001 [*] Import block is un-sorted or un-formatted
tardis/util/base.py:12:30: F401 [*] `radioactivedecay.Nuclide` imported but unused
tardis/util/base.py:119:5: D202 [*] No blank lines allowed after function docstring (found 1)
tardis/util/base.py:135:12: C414 Unnecessary `list` call within `set()`
tardis/util/base.py:196:5: D202 [*] No blank lines allowed after function docstring (found 1)
tardis/util/base.py:234:13: PIE790 [*] Unnecessary `pass` statement
tardis/util/base.py:344:5: RET505 Unnecessary `else` after `return` statement
tardis/util/base.py:349:5: D202 [*] No blank lines allowed after function docstring (found 1)
tardis/util/base.py:405:5: D202 [*] No blank lines allowed after function docstring (found 1)
tardis/util/base.py:483:5: D202 [*] No blank lines allowed after function docstring (found 1)
tardis/util/base.py:502:5: D202 [*] No blank lines allowed after function docstring (found 1)
tardis/util/base.py:522:5: E722 Do not use bare `except`
tardis/util/base.py:523:22: SIM210 Remove unnecessary `True if ... else False`
tardis/util/base.py:630:5: RET505 Unnecessary `elif` after `return` statement
tardis/util/base.py:776:5: D412 [*] No blank lines allowed between a section header and its content ("Parameters")
tardis/visualization/__init__.py:3:1: I001 [*] Import block is un-sorted or un-formatted
tardis/visualization/__init__.py:3:57: F401 `tardis.visualization.tools.convergence_plot.ConvergencePlots` imported but unused; consider removing, adding to `__all__`, or using a redundant alias
tardis/visualization/__init__.py:6:5: F401 `tardis.visualization.widgets.shell_info.shell_info_from_simulation` imported but unused; consider removing, adding to `__all__`, or using a redundant alias
tardis/visualization/__init__.py:7:5: F401 `tardis.visualization.widgets.shell_info.shell_info_from_hdf` imported but unused; consider removing, adding to `__all__`, or using a redundant alias
tardis/visualization/__init__.py:9:52: F401 `tardis.visualization.widgets.line_info.LineInfoWidget` imported but unused; consider removing, adding to `__all__`, or using a redundant alias
tardis/visualization/__init__.py:10:51: F401 `tardis.visualization.widgets.grotrian.GrotrianWidget` imported but unused; consider removing, adding to `__all__`, or using a redundant alias
tardis/visualization/__init__.py:11:59: F401 `tardis.visualization.widgets.custom_abundance.CustomAbundanceWidget` imported but unused; consider removing, adding to `__all__`, or using a redundant alias
tardis/visualization/__init__.py:12:50: F401 `tardis.visualization.tools.sdec_plot.SDECPlotter` imported but unused; consider removing, adding to `__all__`, or using a redundant alias
tardis/visualization/__init__.py:13:53: F401 `tardis.visualization.tools.rpacket_plot.RPacketPlotter` imported but unused; consider removing, adding to `__all__`, or using a redundant alias
tardis/visualization/__init__.py:14:49: F401 `tardis.visualization.tools.liv_plot.LIVPlotter` imported but unused; consider removing, adding to `__all__`, or using a redundant alias
tardis/visualization/plot_util.py:3:1: I001 [*] Import block is un-sorted or un-formatted
tardis/visualization/plot_util.py:31:27: W605 [*] Invalid escape sequence: `\m`
tardis/visualization/plot_util.py:31:34: W605 [*] Invalid escape sequence: `\{`
tardis/visualization/plot_util.py:31:40: W605 [*] Invalid escape sequence: `\}`
tardis/visualization/plot_util.py:42:5: RET505 Unnecessary `else` after `return` statement
tardis/visualization/tools/convergence_plot.py:3:1: I001 [*] Import block is un-sorted or un-formatted
tardis/visualization/tools/convergence_plot.py:4:25: F401 [*] `matplotlib.cm` imported but unused
tardis/visualization/tools/convergence_plot.py:5:29: F401 [*] `matplotlib.colors` imported but unused
tardis/visualization/tools/convergence_plot.py:39:24: UP004 [*] Class `ConvergencePlots` inherits from `object`
tardis/visualization/tools/convergence_plot.py:321:13: ISC003 Explicitly concatenated string should be implicitly concatenated
tardis/visualization/tools/liv_plot.py:1:1: I001 [*] Import block is un-sorted or un-formatted
tardis/visualization/tools/liv_plot.py:25:9: D202 [*] No blank lines allowed after function docstring (found 1)
tardis/visualization/tools/liv_plot.py:48:9: D202 [*] No blank lines allowed after function docstring (found 1)
tardis/visualization/tools/liv_plot.py:312:13: RET506 Unnecessary `elif` after `raise` statement
tardis/visualization/tools/liv_plot.py:313:24: G010 [*] Logging statement uses `warn` instead of `warning`
tardis/visualization/tools/rpacket_plot.py:1:1: I001 [*] Import block is un-sorted or un-formatted
tardis/visualization/tools/rpacket_plot.py:3:18: F401 [*] `pandas` imported but unused
tardis/visualization/tools/rpacket_plot.py:6:26: F401 [*] `plotly.express` imported but unused
tardis/visualization/tools/rpacket_plot.py:101:13: RET505 Unnecessary `else` after `return` statement
tardis/visualization/tools/rpacket_plot.py:110:114: W291 Trailing whitespace
tardis/visualization/tools/rpacket_plot.py:115:9: D202 [*] No blank lines allowed after function docstring (found 1)
tardis/visualization/tools/rpacket_plot.py:231:35: ISC003 Explicitly concatenated string should be implicitly concatenated
tardis/visualization/tools/rpacket_plot.py:481:9: D202 [*] No blank lines allowed after function docstring (found 1)
tardis/visualization/tools/rpacket_plot.py:615:35: ISC003 Explicitly concatenated string should be implicitly concatenated
tardis/visualization/tools/rpacket_plot.py:646:9: D202 [*] No blank lines allowed after function docstring (found 1)
tardis/visualization/tools/sdec_plot.py:202:9: RET505 Unnecessary `elif` after `return` statement
tardis/visualization/tools/sdec_plot.py:343:13: RET505 Unnecessary `elif` after `return` statement
tardis/visualization/tools/sdec_plot.py:460:9: RET505 Unnecessary `else` after `return` statement
tardis/visualization/tools/sdec_plot.py:496:9: RET505 Unnecessary `elif` after `return` statement
tardis/visualization/tools/sdec_plot.py:531:13: RET506 Unnecessary `else` after `raise` statement
tardis/visualization/tools/sdec_plot.py:699:13: RET506 Unnecessary `else` after `raise` statement
tardis/visualization/tools/tests/test_convergence_plot.py:3:1: I001 [*] Import block is un-sorted or un-formatted
tardis/visualization/tools/tests/test_convergence_plot.py:6:36: F401 [*] `tardis.tests.test_util.monkeysession` imported but unused
tardis/visualization/tools/tests/test_convergence_plot.py:87:24: PIE808 [*] Unnecessary `start` argument in `range`
tardis/visualization/tools/tests/test_convergence_plot.py:111:22: PIE808 [*] Unnecessary `start` argument in `range`
tardis/visualization/tools/tests/test_convergence_plot.py:198:9: E712 Avoid equality comparisons to `False`; use `if not ...:` for false checks
tardis/visualization/tools/tests/test_convergence_plot.py:215:9: E712 Avoid equality comparisons to `False`; use `if not ...:` for false checks
tardis/visualization/tools/tests/test_convergence_plot.py:220:40: F811 Redefinition of unused `monkeysession` from line 6
tardis/visualization/tools/tests/test_rpacket_plot.py:3:1: I001 [*] Import block is un-sorted or un-formatted
tardis/visualization/tools/tests/test_sdec_plot.py:343:17: F631 Assert test is a non-empty tuple, which is always `True`
tardis/visualization/tools/tests/test_sdec_plot.py:475:13: F631 Assert test is a non-empty tuple, which is always `True`
tardis/visualization/tools/tests/test_sdec_plot.py:557:13: PLW0127 Self-assignment of variable `observed_spectrum`
tardis/visualization/tools/tests/test_sdec_plot.py:618:13: F631 Assert test is a non-empty tuple, which is always `True`
tardis/visualization/widgets/custom_abundance.py:2:1: I001 [*] Import block is un-sorted or un-formatted
tardis/visualization/widgets/custom_abundance.py:32:60: F811 [*] Redefinition of unused `quantity_linspace` from line 16
tardis/visualization/widgets/custom_abundance.py:604:47: UP032 [*] Use f-string instead of `format` call
tardis/visualization/widgets/custom_abundance.py:737:9: SIM103 Return the condition directly
tardis/visualization/widgets/custom_abundance.py:741:9: RET505 Unnecessary `else` after `return` statement
tardis/visualization/widgets/custom_abundance.py:916:12: E712 Avoid equality comparisons to `True`; use `if obj.new:` for truth checks
tardis/visualization/widgets/custom_abundance.py:1129:9: RET505 Unnecessary `else` after `return` statement
tardis/visualization/widgets/custom_abundance.py:1420:9: RET506 Unnecessary `else` after `raise` statement
tardis/visualization/widgets/custom_abundance.py:1472:27: UP031 Use format specifiers instead of percent format
tardis/visualization/widgets/custom_abundance.py:1687:36: UP032 [*] Use f-string instead of `format` call
tardis/visualization/widgets/custom_abundance.py:1723:9: F811 Redefinition of unused `input_d_time_0_eventhandler` from line 1712
tardis/visualization/widgets/custom_abundance.py:1753:13: F821 Undefined name `display`
tardis/visualization/widgets/custom_abundance.py:1755:13: F821 Undefined name `display`
tardis/visualization/widgets/custom_abundance.py:1757:13: F821 Undefined name `display`
tardis/visualization/widgets/grotrian.py:6:1: I001 [*] Import block is un-sorted or un-formatted
tardis/visualization/widgets/grotrian.py:13:8: ICN001 `matplotlib` should be imported as `mpl`
tardis/visualization/widgets/grotrian.py:608:35: ISC003 Explicitly concatenated string should be implicitly concatenated
tardis/visualization/widgets/grotrian.py:753:35: ISC003 Explicitly concatenated string should be implicitly concatenated
tardis/visualization/widgets/grotrian.py:923:20: C408 Unnecessary `dict` call (rewrite as a literal)
tardis/visualization/widgets/grotrian.py:1157:9: B010 [*] Do not call `setattr` with a constant attribute value. It is not any safer than normal property access.
tardis/visualization/widgets/grotrian.py:1158:9: B010 [*] Do not call `setattr` with a constant attribute value. It is not any safer than normal property access.
tardis/visualization/widgets/grotrian.py:1176:9: RET505 Unnecessary `elif` after `return` statement
tardis/visualization/widgets/line_info.py:3:1: I001 [*] Import block is un-sorted or un-formatted
tardis/visualization/widgets/line_info.py:3:8: F401 [*] `re` imported but unused
tardis/visualization/widgets/line_info.py:8:8: F401 [*] `qgrid` imported but unused
tardis/visualization/widgets/line_info.py:306:21: E712 Avoid equality comparisons to `False`; use `if not ...:` for false checks
tardis/visualization/widgets/shell_info.py:1:1: I001 [*] Import block is un-sorted or un-formatted
tardis/visualization/widgets/shell_info.py:1:25: F401 [*] `tardis.base.run_tardis` imported but unused
tardis/visualization/widgets/shell_info.py:2:51: F401 [*] `tardis.io.atom_data.atom_web_download.download_atom_data` imported but unused
tardis/visualization/widgets/shell_info.py:12:17: F401 [*] `numpy` imported but unused
tardis/visualization/widgets/shell_info.py:299:25: PIE808 [*] Unnecessary `start` argument in `range`
tardis/visualization/widgets/tests/test_custom_abundance.py:2:1: I001 [*] Import block is un-sorted or un-formatted
tardis/visualization/widgets/tests/test_custom_abundance.py:4:8: F401 [*] `tardis` imported but unused
tardis/visualization/widgets/tests/test_custom_abundance.py:8:36: F401 [*] `tardis.tests.test_util.monkeysession` imported but unused
tardis/visualization/widgets/tests/test_custom_abundance.py:34:19: F811 Redefinition of unused `monkeysession` from line 8
tardis/visualization/widgets/tests/test_custom_abundance.py:156:20: E712 Avoid equality comparisons to `True`; use `if caw.btn_next.disabled:` for truth checks
tardis/visualization/widgets/tests/test_custom_abundance.py:157:20: E712 Avoid equality comparisons to `True`; use `if caw.btn_prev.disabled:` for truth checks
tardis/visualization/widgets/tests/test_custom_abundance.py:225:34: UP032 [*] Use f-string instead of `format` call
tardis/visualization/widgets/tests/test_custom_abundance.py:225:50: RUF015 Prefer `next(iter(unique_v))` over single element slice
tardis/visualization/widgets/tests/test_line_info.py:1:1: I001 [*] Import block is un-sorted or un-formatted
tardis/visualization/widgets/tests/test_line_info.py:7:36: F401 [*] `tardis.tests.test_util.monkeysession` imported but unused
tardis/visualization/widgets/tests/test_line_info.py:43:20: E712 Avoid equality comparisons to `False`; use `if not species_interactions_df.all(axis=None):` for false checks
tardis/visualization/widgets/tests/test_line_info.py:66:12: E712 Avoid equality comparisons to `False`; use `if not species_interactions_df.all(axis=None):` for false checks
tardis/visualization/widgets/tests/test_line_info.py:89:20: E712 Avoid equality comparisons to `False`; use `if not last_line_counts_df.all(axis=None):` for false checks
tardis/visualization/widgets/tests/test_line_info.py:145:66: F811 Redefinition of unused `monkeysession` from line 7
tardis/visualization/widgets/tests/test_line_info.py:289:16: E712 Avoid equality comparisons to `False`; use `if not bool(selected_species):` for false checks
tardis/visualization/widgets/tests/test_line_info.py:335:12: E712 Avoid equality comparisons to `False`; use `if not ...:` for false checks
tardis/visualization/widgets/tests/test_shell_info.py:1:1: I001 [*] Import block is un-sorted or un-formatted
tardis/visualization/widgets/tests/test_shell_info.py:5:36: F401 [*] `tardis.tests.test_util.monkeysession` imported but unused
tardis/visualization/widgets/tests/test_shell_info.py:142:50: F811 Redefinition of unused `monkeysession` from line 5
tardis/visualization/widgets/util.py:3:1: I001 [*] Import block is un-sorted or un-formatted
Found 1024 errors.
[*] 465 fixable with the `--fix` option (132 hidden fixes can be enabled with the `--unsafe-fixes` option).
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