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updated new readme
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hermancollin authored Jun 15, 2021
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# seg-pns-bf-model
default OM model that works at a resolution of 0.1 micrometer per pixel

# Steps to train this model
1. Get ADS version: [[5af8cbb]](https://github.com/neuropoly/axondeepseg/commit/5af8cbb1e782092ac46e0586eca0f827c0eff938)
2. Get the data: Available at NeuroPoly lab in
```
duke/projects/axondeepseg/20201016_model_seg_pns_bf/10_model_selected/dataset_training/dataset_patches/20210121_training_gps_01_filtered
```
4. Run the "02-training_guideline-pns.ipynb" notebook available at NeuroPoly lab in
```
duke/projects/axondeepseg/20201016_model_seg_pns_bf/10_model_selected/notebooks
```
6. After successfully running all the cells, the trained model file will be saved under the directory: AxonDeepSeg/axondeepseg/models/

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