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Feature/setup experiments #10

Merged
merged 14 commits into from
Sep 17, 2023
Merged

Feature/setup experiments #10

merged 14 commits into from
Sep 17, 2023

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azoz01
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@azoz01 azoz01 commented Sep 17, 2023

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@azoz01 azoz01 merged commit b12f87a into develop Sep 17, 2023
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Coverage

coverage
FileStmtsMissCoverMissing
liltab/data
   __init__.py00100% 
   dataloaders.py640100% 
   datasets.py60198%140
   factory.py14140%1–54
   preprocessing.py60100% 
liltab/model
   __init__.py00100% 
   heterogenous_attributes_network.py970100% 
   utils.py280100% 
liltab/train
   __init__.py00100% 
   logger.py671972%25, 32, 59, 62, 67, 70, 73–74, 77–78, 81–82, 91, 114–116, 119–121
   trainer.py641281%57–58, 122, 125, 134, 137, 146, 149, 153–154, 158, 162
   utils.py400100% 
TOTAL4404690% 

Tests Skipped Failures Errors Time
42 0 💤 0 ❌ 0 🔥 13.480s ⏱️

azoz01 added a commit that referenced this pull request Oct 26, 2023
* First working of few-shot datasets

* Formatting, docstrings and minor fixes

* Fix black formatter in code check

* Fix requirements

* Move few shot to dataloaders; Fix CI; Add makefile

* Add tests to datasets.py

* Implement unit tests

* Fix github action

* Fix requirements

* Fix requirements

* Remove unwanted files

* Fix requirements

* Resolve conversations

* Feature/inference networks (#5)

* Prototype in notebook

* Move code from notebook to files

* Add docstrings to HeterogenousAttributesNetwork

* Extend flake8 max line length. Fix docstings

* Fix check

* Fix black

* Extend black and flake8 to test code

* Fix check

* Fix check

* Add init files

* Remove unwanted files

* Write tests to model/utils.py

* Add unit tests to heterogenous attributes network

* Add torchtest to requirements

* Resolve conversations

* Add inference embedding network to _make_prediction

* Feature/training code (#6)

* Prototype in notebook

* Move code from notebook to files

* Add docstrings to HeterogenousAttributesNetwork

* Extend flake8 max line length. Fix docstings

* Fix check

* Fix black

* Extend black and flake8 to test code

* Add init files

* Remove unwanted files

* Write tests to model/utils.py

* Add unit tests to heterogenous attributes network

* Add training code with docstrings

* Add training script

* Fix failing tests

* Add tests + fixes in dataloader

* lint code

* apply suggestions from comments,
refactor makefile,
adjust tests

* lint code

* Minor fix of docstrings

---------

Co-authored-by: DawidPludowski <dawid.pludowski@gmail.com>

* Add simple reporting (#7)

* Add simple reporting

* Fix formatting

* Add synthetic data experiment config

* Feature/tensorboard_reporting (#8)

* add loggers; add callbacks

* add profiler; add log directories

* add docs; refactor code; add logger tests

* format code; remove data files

* update .gitignore

* final fixes

* rm data

* rename class

* Feature/setup experiments (#9)

* Add simple reporting

* Fix formatting

* Add synthetic data experiment config

* Add classification support

* Fix configs

* Fix nonfailing check when pytest fails

* Revert changes

* Add experiments scripts

* Fix classification support

* Add early stopping to config

* Final preprations

* Feature/setup experiments (#10)

* Add simple reporting

* Fix formatting

* Add synthetic data experiment config

* Add classification support

* Fix configs

* Fix nonfailing check when pytest fails

* Revert changes

* Add experiments scripts

* Fix classification support

* Add early stopping to config

* Final preprations

* Minor config adjustments

* Feature/setup experiments (#11)

* Add simple reporting

* Fix formatting

* Add synthetic data experiment config

* Add classification support

* Fix configs

* Fix nonfailing check when pytest fails

* Revert changes

* Add experiments scripts

* Fix classification support

* Add early stopping to config

* Final preprations

* Minor config adjustments

* Minor fixes

* Feature/setup experiments (#12)

* Add simple reporting

* Fix formatting

* Add synthetic data experiment config

* Add classification support

* Fix configs

* Fix nonfailing check when pytest fails

* Revert changes

* Add experiments scripts

* Fix classification support

* Add early stopping to config

* Final preprations

* Minor config adjustments

* Minor fixes

* Hotfix network

* Fixes

* Fixes

* Fix classification

* refactor logger interface;
adjust experiments and tests to new interface;
minor fixes, remove obsolate code

* Fix new_classes experiment

* Delete results/01_test_data.pkl

---------

Co-authored-by: DawidPludowski <dawid.pludowski@gmail.com>
Co-authored-by: DawidPludowski <72541839+DawidPludowski@users.noreply.github.com>

* Feature/prepare release (#13)

* Add simple reporting

* Fix formatting

* Add synthetic data experiment config

* Add classification support

* Fix configs

* Fix nonfailing check when pytest fails

* Revert changes

* Add experiments scripts

* Fix classification support

* Add early stopping to config

* Final preprations

* Minor config adjustments

* Minor fixes

* Hotfix network

* Fixes

* Fixes

* Fix classification

* refactor logger interface;
adjust experiments and tests to new interface;
minor fixes, remove obsolate code

* Fix new_classes experiment

* Prepare pip release

* Add readme

* next release; add release to makefile

* Fix

* Delete pickle

* Format

---------

Co-authored-by: DawidPludowski <dawid.pludowski@gmail.com>

* New version

---------

Co-authored-by: DawidPludowski <dawid.pludowski@gmail.com>
Co-authored-by: DawidPludowski <72541839+DawidPludowski@users.noreply.github.com>
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1 participant