Merge branch 'master' of github.com:briandconnelly/BEACONToolkit

analysis/data/parasite_data.csv

@@ -1,4 +1,4 @@
-Virulence,Replicate,FinalDiversity
+Virulence,Replicate,ShannonDiversity
 0.5,1,0.0592619
 0.5,2,1.0936
 0.5,3,1.13939
@@ -299,53 +299,53 @@ Virulence,Replicate,FinalDiversity
 1.0,48,0
 1.0,49,0
 1.0,50,0
-None,1,0
-None,2,0
-None,3,0.833645
-None,4,0
-None,5,0.990309
-None,6,0
-None,7,0
-None,8,0
-None,9,0.0614139
-None,10,0.316439
-None,11,0.904773
-None,12,0.884122
-None,13,0
-None,14,0
-None,15,0
-None,16,0
-None,17,0.0134949
-None,18,0.882519
-None,19,0
-None,20,0.98683
-None,21,0
-None,22,0
-None,23,0
-None,24,0
-None,25,0
-None,26,0
-None,27,1.70272
-None,28,0.169556
-None,29,0.94975
-None,30,0.240084
-None,31,0.925913
-None,32,0
-None,33,0.693356
-None,34,0
-None,35,0.31017
-None,36,0
-None,37,0
-None,38,0
-None,39,0
-None,40,0
-None,41,0
-None,42,0
-None,43,0
-None,44,0
-None,45,0.391061
-None,46,0.00166884
-None,47,0
-None,48,0.444463
-None,49,0.383512
-None,50,0.511329
+ ,1,0
+ ,2,0
+ ,3,0.833645
+ ,4,0
+ ,5,0.990309
+ ,6,0
+ ,7,0
+ ,8,0
+ ,9,0.0614139
+ ,10,0.316439
+ ,11,0.904773
+ ,12,0.884122
+ ,13,0
+ ,14,0
+ ,15,0
+ ,16,0
+ ,17,0.0134949
+ ,18,0.882519
+ ,19,0
+ ,20,0.98683
+ ,21,0
+ ,22,0
+ ,23,0
+ ,24,0
+ ,25,0
+ ,26,0
+ ,27,1.70272
+ ,28,0.169556
+ ,29,0.94975
+ ,30,0.240084
+ ,31,0.925913
+ ,32,0
+ ,33,0.693356
+ ,34,0
+ ,35,0.31017
+ ,36,0
+ ,37,0
+ ,38,0
+ ,39,0
+ ,40,0
+ ,41,0
+ ,42,0
+ ,43,0
+ ,44,0
+ ,45,0.391061
+ ,46,0.00166884
+ ,47,0
+ ,48,0.444463
+ ,49,0.383512
+ ,50,0.511329