action use partials only

beast-dev · Oct 25, 2024 · 826c4f6 · 826c4f6
1 parent 33ff584
commit 826c4f6
Showing 1 changed file with 1 addition and 1 deletion.
diff --git a/src/dr/evomodel/treedatalikelihood/BeagleDataLikelihoodDelegate.java b/src/dr/evomodel/treedatalikelihood/BeagleDataLikelihoodDelegate.java
@@ -514,7 +514,7 @@ public BeagleDataLikelihoodDelegate(Tree tree,
                     throw new TaxonList.MissingTaxonException("Taxon, " + id + ", in tree, " + tree.getId() +
                             ", is not found in patternList, " + patternList.getId());
                 } else {
-                    if (useAmbiguities) {
+                    if (useAmbiguities || settings.useAction) {
                         setPartials(beagle, patternList, index, i);
                     } else {
                         setStates(beagle, patternList, index, i);