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belowlab

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  1. IMMerge IMMerge Public

    Tool to merge VCF genotype files at scale

    Python 8 5

  2. ldsc ldsc Public

    Forked from bulik/ldsc

    LD Score Regression (LDSC)

    HTML 8 5

  3. shapeit4 shapeit4 Public

    Forked from odelaneau/shapeit4

    Segmented HAPlotype Estimation and Imputation Tool

    C++ 1 1

  4. ukbb-phecode-mapping ukbb-phecode-mapping Public

    Snakemake pipeline for reproducibly mapping the ICD codes in UK Biobank datasets to Phecodes

    Python 1

  5. tnprc-pedigrees tnprc-pedigrees Public

    Pedigree structures for "Pedigree reconstruction and distant pairwise kinship estimation from genome sequence data: A demonstration in a population of rhesus macaques (Macaca mulatta)"

    Shell

  6. primus_v190 primus_v190 Public

    Perl

Repositories

Showing 10 of 53 repositories
  • compadre-website Public
    belowlab/compadre-website’s past year of commit activity
    HTML 0 0 0 0 Updated Oct 1, 2024
  • compadre Public

    IBD-based pedigree generation software, maximizing utility of the tools PRIMUS and ERSA

    belowlab/compadre’s past year of commit activity
    Perl 0 0 1 1 Updated Sep 30, 2024
  • rShiny_Bias Public Forked from Lbreidenbach/rShiny_Bias
    belowlab/rShiny_Bias’s past year of commit activity
    R 0 1 0 0 Updated Sep 19, 2024
  • hap-ibd Public Forked from browning-lab/hap-ibd

    The hap-ibd program detects identity-by-descent segments in phased genotype data.

    belowlab/hap-ibd’s past year of commit activity
    Java 0 8 0 0 Updated Sep 16, 2024
  • McBias Public Forked from Lbreidenbach/McBias

    McBias is an r package designed to help estimate the effects of bias found in large datasets of convenience

    belowlab/McBias’s past year of commit activity
    R 0 1 0 0 Updated Sep 11, 2024
  • ldsc Public Forked from bulik/ldsc

    LD Score Regression (LDSC)

    belowlab/ldsc’s past year of commit activity
    HTML 8 GPL-3.0 347 0 1 Updated Aug 28, 2024
  • drive Public Forked from jtb324/IBDCluster

    A cli tool to analyze ibd sharing for a specific locus for multiple phenotypes

    belowlab/drive’s past year of commit activity
    Python 0 Apache-2.0 1 0 0 Updated Aug 21, 2024
  • CCHC_lipidomics Public
    belowlab/CCHC_lipidomics’s past year of commit activity
    Jupyter Notebook 0 MIT 0 0 1 Updated Aug 13, 2024
  • PyVCF3 Public Forked from dridk/PyVCF3

    A Variant Call Format reader for Python.

    belowlab/PyVCF3’s past year of commit activity
    Python 0 224 0 0 Updated Aug 12, 2024
  • staged-recipes Public Forked from conda-forge/staged-recipes

    A place to submit conda recipes before they become fully fledged conda-forge feedstocks

    belowlab/staged-recipes’s past year of commit activity
    Python 0 BSD-3-Clause 4,904 0 0 Updated Aug 9, 2024
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