Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

[ADAM-532] Fix wigFix intermittent test failure #546

Merged
merged 1 commit into from
Jan 10, 2015

Conversation

laserson
Copy link
Contributor

When reading the converted output, it's possible that the order of the records is undefined. I added a sort which should make things more reliable.

Fixes #532.

When reading the converted output, it's possible that the order of the records is undefined.  I added a sort which should make things more reliable.

Fixes bigdatagenomics#532.
@laserson
Copy link
Contributor Author

Pretty sure this should fix the problem.

@AmplabJenkins
Copy link

Test FAILed.
Refer to this link for build results (access rights to CI server needed):
https://amplab.cs.berkeley.edu/jenkins//job/ADAM-prb/527/

Build result: FAILURE

GitHub pull request #546 of commit 7056125 automatically merged.[EnvInject] - Loading node environment variables.Building remotely on amp-jenkins-worker-05 (centos) in workspace /home/jenkins/workspace/ADAM-prb > git rev-parse --is-inside-work-tree # timeout=10Fetching changes from the remote Git repository > git config remote.origin.url https://github.com/bigdatagenomics/adam.git # timeout=10Fetching upstream changes from https://github.com/bigdatagenomics/adam.git > git --version # timeout=10 > git fetch --tags --progress https://github.com/bigdatagenomics/adam.git +refs/pull/:refs/remotes/origin/pr/ > git rev-parse origin/pr/546/merge^{commit} # timeout=10Checking out Revision 646efe2 (detached) > git config core.sparsecheckout # timeout=10 > git checkout -f 646efe2 > git rev-list b409bd0004a00c2dac712b5c567963b3e013c8e3 # timeout=10Triggering ADAM-prb ? 2.2.0,centosTriggering ADAM-prb ? 1.0.4,centosTriggering ADAM-prb ? 2.3.0,centosADAM-prb ? 2.2.0,centos completed with result SUCCESSADAM-prb ? 1.0.4,centos completed with result FAILUREADAM-prb ? 2.3.0,centos completed with result SUCCESS
Test FAILed.

@laserson
Copy link
Contributor Author

Jenkinst, retest this please.

@laserson
Copy link
Contributor Author

Jenkins, retest this please.

@AmplabJenkins
Copy link

Test PASSed.
Refer to this link for build results (access rights to CI server needed):
https://amplab.cs.berkeley.edu/jenkins//job/ADAM-prb/528/
Test PASSed.

fnothaft added a commit that referenced this pull request Jan 10, 2015
[ADAM-532] Fix wigFix intermittent test failure
@fnothaft fnothaft merged commit 229efb1 into bigdatagenomics:master Jan 10, 2015
@fnothaft
Copy link
Member

Merged! Thanks @laserson.

@laserson laserson deleted the ADAM-532-wigfix-test branch January 10, 2015 22:51
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

Successfully merging this pull request may close these issues.

Intermittent unit test failures in Wig feature import
3 participants