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@bihealth

Berlin Institute of Health

BIH Core Unit Bioinformatics & BIH HPC IT

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  1. sodar-server sodar-server Public

    SODAR: System for Omics Data Access and Retrieval

    Python 14 3

  2. sodar-core sodar-core Public

    SODAR Core: A Django-based framework for building scientific data management web apps

    Python 9 1

  3. scelvis scelvis Public

    🎇 SCelVis - web-based visualization of single-cell data. ➡️ ➡️ Demo ➡️➡️

    Python 21 5

  4. digestiflow-server digestiflow-server Public

    🍸 Web-based database system for flow cell management (incl. REST API)

    Python 15 3

  5. altamisa altamisa Public

    AltamISA: a Python API for ISA-Tab files

    Python 5 2

Repositories

Showing 10 of 171 repositories
  • howtotalk Public

    How to talk to your bioinformatician

    bihealth/howtotalk’s past year of commit activity
    HTML 0 CC0-1.0 0 0 0 Updated Oct 3, 2024
  • nf-core-configs Public Forked from nf-core/configs

    Config files used to define parameters specific to compute environments at different Institutions

    bihealth/nf-core-configs’s past year of commit activity
    Nextflow 0 MIT 266 0 1 Updated Oct 3, 2024
  • sodar-server Public

    SODAR: System for Omics Data Access and Retrieval

    bihealth/sodar-server’s past year of commit activity
    Python 14 MIT 3 338 (6 issues need help) 0 Updated Oct 2, 2024
  • reev-frontend-lib Public

    Re-useable components from REEV

    bihealth/reev-frontend-lib’s past year of commit activity
    TypeScript 0 1 1 7 Updated Oct 2, 2024
  • ood-bih-rstudio-server Public

    Open OnDemand App: RStudio Server

    bihealth/ood-bih-rstudio-server’s past year of commit activity
    Shell 1 MIT 1 1 0 Updated Oct 2, 2024
  • ood-bih-jupyter Public

    Open OnDemand App: Jupyter

    bihealth/ood-bih-jupyter’s past year of commit activity
    HTML 0 MIT 0 0 0 Updated Oct 2, 2024
  • irods-docker Public

    Docker container that runs an iRODS server (iCAT enabled or not).

    bihealth/irods-docker’s past year of commit activity
    Jinja 1 MIT 0 18 0 Updated Oct 1, 2024
  • dotty Public

    cdot-based transcript projections

    bihealth/dotty’s past year of commit activity
    Python 0 MIT 0 2 0 Updated Sep 30, 2024
  • auto-acmg Public

    Automatic classification of sequence variants and CNVs according to ACMG criteria.

    bihealth/auto-acmg’s past year of commit activity
    Python 6 GPL-3.0 0 6 0 Updated Sep 30, 2024
  • reev Public

    REEV: Explanation and Evaluation of Variants

    bihealth/reev’s past year of commit activity
    TypeScript 8 MIT 2 39 3 Updated Sep 30, 2024
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