Bugfix

LLVMgold.so is still missing, so we use lld instead.
bioconda · Oct 30, 2024 · 1382832 · 1382832
1 parent 5c9730b
commit 1382832
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diff --git a/recipes/hictkpy/build.sh b/recipes/hictkpy/build.sh
@@ -17,6 +17,8 @@ if [[ ${HOST} =~ .*darwin.* ]]; then
   CMAKE_ARGS+=" -DCMAKE_OSX_SYSROOT=${CONDA_BUILD_SYSROOT}"
   conan_profile='apple-clang'
 else
+  # Workaround missing LLVMgold.so on Linux
+  CMAKE_ARGS+=' -DCMAKE_LINKER_TYPE=LLD'
   CMAKE_ARGS+=" -DCMAKE_TOOLCHAIN_FILE=${RECIPE_DIR}/cross-linux.cmake"
   conan_profile='clang'
 fi

diff --git a/recipes/hictkpy/meta.yaml b/recipes/hictkpy/meta.yaml
@@ -35,6 +35,7 @@ requirements:
     - hdf5 >=1.12
     - libarrow >=16
     - libdeflate >=1
+    - lld  # [linux]
     - nanobind >=2
     - numpy
     - scikit-build-core >=0.10