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bioconductor-rhisat2: annotate build failure
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aliciaaevans committed Dec 30, 2024
1 parent e6c566f commit a0583ce
Showing 1 changed file with 4 additions and 1 deletion.
5 changes: 4 additions & 1 deletion recipes/bioconductor-rhisat2/build_failure.osx-64.yaml
Original file line number Diff line number Diff line change
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recipe_sha: 8c3a30622d17c4e1d0b86c6c3d0fef327c2d3563ea7c213237aa15d1819e817b # The hash of the recipe's meta.yaml at which this recipe failed to build.
skiplist: false # Set to true to skiplist this recipe so that it will be ignored as long as its latest commit is the one given above.
skiplist: true # Set to true to skiplist this recipe so that it will be ignored as long as its latest commit is the one given above.
log: |2-
return _func_defaulting_env_to_os_environ("call", *popenargs, **kwargs)
File "/opt/mambaforge/envs/bioconda/lib/python3.10/site-packages/conda_build/utils.py", line 380, in _func_defaulting_env_to_os_environ
Expand Down Expand Up @@ -102,3 +102,6 @@ log: |2-
ccnt_lut.cpp ref_read.cpp alphabet.cpp shmem.cpp edit.cpp gfm.cpp reference.cpp ds.cpp multikey_qsort.cpp limit.cpp random_source.cpp tinythread.cpp diff_sample.cpp hisat2_build_main.cpp \
-lpthread
# Last 100 lines of the build log.

category: compiler error
reason: 'iostream' file not found

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