meryl: add linux-aarch64 and osx-arm64 build (#52237)

* meryl: add linux-aarch64 build

Signed-off-by: Martin Tzvetanov Grigorov <mgrigorov@apache.org>

* add aarch64 patch

* Update build.sh

* try arm64

* Update meta.yaml

* meryl: Use git_url to be able to patch the Git submodule meryl-utility

Signed-off-by: Martin Tzvetanov Grigorov <mgrigorov@apache.org>

* meryl: patch align-ssw.C for ARM64 too

Signed-off-by: Martin Tzvetanov Grigorov <mgrigorov@apache.org>

* Update meta.yaml

* Update build.sh

* Update meta.yaml

---------

Signed-off-by: Martin Tzvetanov Grigorov <mgrigorov@apache.org>
Co-authored-by: mencian <joshua.zhuang@yahoo.com>
Co-authored-by: Joshua Zhuang <71105179+mencian@users.noreply.github.com>

recipes/meryl/0003-align.patch

@@ -0,0 +1,14 @@
+diff --git a/src/utility/src/align/align-ksw2-extz2-sse.C b/src/utility/src/align/align-ksw2-extz2-sse.C
+index d237b48..f96c6fa 100644
+--- a/src/utility/src/align/align-ksw2-extz2-sse.C
++++ b/src/utility/src/align/align-ksw2-extz2-sse.C
+@@ -304,6 +304,8 @@ void ksw_extz2_sse(void *km, int qlen, const uint8_t *query, int tlen, const uin
+ 		kfree(km, mem2); kfree(km, off);
+ 	}
+ }
+-#endif // __SSE2__
+
+ }  //  merylutil::align::ksw2::v1
++
++#endif // __SSE2__
++

recipes/meryl/build.sh

@@ -1,7 +1,14 @@
 #!/bin/bash
 
+set -xe
+
+ARCH_BUILD="-m64 -msse4.1"
+case $(uname -m) in
+    arm64|aarch64) ARCH_BUILD="" ;;
+esac
+
 make -C src BUILD_DIR="$(pwd)" \
 	TARGET_DIR="${PREFIX}" \
 	CXX="${CXX}" \
-	CXXFLAGS="${CXXFLAGS} -O3 -I${PREFIX}/include" \
+	CXXFLAGS="${CXXFLAGS} -O3 -Wno-c++20-extensions -Wno-inline-namespace-reopened-noninline -Wno-format ${ARCH_BUILD} -I${PREFIX}/include" \
 	LDFLAGS="${LDFLAGS} -fopenmp -L${PREFIX}/lib" -j"${CPU_COUNT}"