Update SeqKit to v2.7.0

[shenwei356]

Describe your pull request here

Changes

• SeqKit v2.7.0 - 2024-01-31
  • seqkit:
    • Grouping subcommands in help message, which is intuitive for beginners.
  • seqkit grep:
    • New flag: -D/--allow-duplicated-patterns for outputting records multiple times when duplicated patterns are given. #427
  • seqkit subseq:
    • Use the ID regular expression from the option --id-regexp to create FASTA index file. This solves the panic happened for sequences containing tabs in the headers. #432
  • seqkit split/sort/shuffle:
    • When using the two-pass mode (-2/--two-pass), replace possible tabs in the sequence header.
  • seqkit rmdup:
    • Write an empty file of duplicate numbers and lists of IDs even if there's no duplicates when using -D/--dup-num-file. #436
  • seqkit stats:
    • New flag -S/--skip-file-check to skip input file checking when given files or a file list. It's very useful if you run it with millions of files.

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[shenwei356]

@BiocondaBot please add label

[shenwei356]

Thanks!

[apcamargo]

No worries :)