Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

adding the conda recipes for inmoose tool #51274

Merged
merged 18 commits into from
Oct 17, 2024
Merged
Changes from 13 commits
Commits
File filter

Filter by extension

Filter by extension

Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
65 changes: 65 additions & 0 deletions recipes/inmoose/meta.yaml
Original file line number Diff line number Diff line change
@@ -0,0 +1,65 @@
{% set name = "inmoose" %}
{% set version = "0.7.2" %}
{% set sha256 = "e7e16d0d20335476f66a24158f26cbadac4f1c8244684441f5b2451c1ae3c8b7" %}

package:
name: {{ name|lower }}
version: {{ version }}

source:
url: https://github.com/epigenelabs/inmoose/archive/refs/tags/v{{ version }}.tar.gz
sha256: {{ sha256 }}

build:
noarch: python
number: 0
EngyNasr marked this conversation as resolved.
Show resolved Hide resolved
run_exports:
- {{ pin_subpackage('inmoose', max_pin="x.x") }}
script: "{{ PYTHON }} -m pip install . -vv --no-deps"

requirements:
host:
- python
- pip
martin-g marked this conversation as resolved.
Show resolved Hide resolved
run:
- python
- numpy
- scipy
- pandas
- seaborn
- matplotlib-base
- biopython
- tqdm
- pysam
- networkx
- h5py
- psutil
- lmfit
- click
- scanpy
- anndata
- scikit-learn


test:
imports:
- inmoose
- inmoose.pycombat
- inmoose.consensus_clustering.consensus_clustering

commands:
- inmoose --help
- inmoose --version

about:
home: https://github.com/epigenelabs/inmoose/tree/master
license: GPL-3.0-or-later
license_family: GPL3
license_file: LICENSE
summary: 'InMoose is the Integrated Multi Omic Open Source Environment. It is a collection of tools for the analysis of omic data.'

extra:
container:
# click requires a unicode locale when used with Python 3
# extended-base generates en_US.UTF-8 locale and sets LC_ALL, LANG properly
extended-base: true # [py3k]
Loading