Update diamond to 2.1.10

[BiocondaBot]

Update diamond: 2.1.9 → 2.1.10

Info	Link or Description
Recipe	recipes/diamond (click to view/edit other files)
Summary	Accelerated BLAST compatible local sequence aligner
Home	https://github.com/bbuchfink/diamond
Releases	https://github.com/bbuchfink/diamond/tags
Author	@bbuchfink

---

This pull request was automatically generated (see docs).

[coderabbitai]

📝 Walkthrough

Walkthrough

The pull request introduces an update to the meta.yaml file for the diamond package. The version number is incremented from "2.1.9" to "2.1.10", indicating a new release of the package. Alongside this version update, the SHA256 checksum has been modified from "4cde9df78c63e8aef9df1e3265cd06a93ce1b047d6dba513a1437719b70e9d88" to "c6ede5df30d9d496af314e740964c35a0e358458d9c8d9b8dd517d69828d9981". These changes are standard for package updates and suggest that there may have been modifications to the source code or its dependencies.

Possibly related PRs

• Update mhcflurry to 2.1.4 #51097: Updates the version and SHA256 checksum in the meta.yaml file, similar to the changes in the diamond package.
• Update dajin2 to 0.5.5 #51230: Also updates the version and SHA256 checksum in the meta.yaml file, reflecting a similar type of change.
• Update gencove to 2.23.0 #51404: Consistent with the changes made in the main PR, this PR updates the version and SHA256 checksum for the gencove package.
• Update seqfu to 1.22.3 #51410: Updates the version and SHA256 checksum in the meta.yaml file, paralleling the updates in the main PR.
• Update gempipe to 1.35.5 #51422: Includes a version and SHA256 checksum update in the meta.yaml file, akin to the updates in the main PR.
• Update ms2deepscore to 2.2.0 #51452: Reflects a version and SHA256 checksum update in the meta.yaml file, similar to the changes in the main PR.
• Update biobb_cmip to 5.0.0 #51455: Comparable to the changes made in the main PR, this PR updates the version and SHA256 checksum for the biobb_cmip package.
• Update phyloacc to 2.4.2 #51458: Involves a version and SHA256 checksum update in the meta.yaml file, consistent with the updates in the main PR.
• Update qtlseq to 2.2.8 #51471: Includes a version and SHA256 checksum update in the meta.yaml file, paralleling the updates in the main PR.
• Update sevenbridges-python to 2.11.1 #51477: Updates the version and SHA256 checksum in the meta.yaml file, reflecting a similar type of change as seen in the main PR.

---

📜 Recent review details

Configuration used: CodeRabbit UI
Review profile: CHILL

📥 Commits

Files that changed from the base of the PR and between 300aead and fd2c75e.

📒 Files selected for processing (1)

• recipes/diamond/meta.yaml (1 hunks)

🧰 Additional context used

🪛 yamllint

recipes/diamond/meta.yaml

[error] 1-1: syntax error: found character '%' that cannot start any token

(syntax)

🔇 Additional comments (4)

recipes/diamond/meta.yaml (4)

1-1: Version update looks good.

The version has been correctly updated from 2.1.9 to 2.1.10, which aligns with the PR objectives.

🧰 Tools

🪛 yamllint

[error] 1-1: syntax error: found character '%' that cannot start any token

(syntax)

---

Line range hint 1-48: Overall changes look good and are well-integrated.

The version and SHA256 updates are correctly propagated throughout the file. The url field uses the new version, and the sha256 field uses the new checksum. The build number is correctly set to 0 for the new version. No other changes were necessary for this type of version update.

🧰 Tools

🪛 yamllint

[error] 1-1: syntax error: found character '%' that cannot start any token

(syntax)

---

1-2: Note on yamllint warning (can be ignored).

The yamllint tool reported a syntax error for the '%' character at the beginning of the file. This is a false positive as the '%' is part of the Jinja2 templating syntax used in Conda recipes. The YAML file is valid when processed by Conda's build system.

🧰 Tools

🪛 yamllint

[error] 1-1: syntax error: found character '%' that cannot start any token

(syntax)

---

2-2: SHA256 checksum updated, verification recommended.

The SHA256 checksum has been updated, which is expected for a new version. However, it's crucial to verify that this checksum corresponds to the correct source file for version 2.1.10.

To verify the SHA256 checksum, you can run the following script:

---

Thank you for using CodeRabbit. We offer it for free to the OSS community and would appreciate your support in helping us grow. If you find it useful, would you consider giving us a shout-out on your favorite social media?

❤️ Share

• X
• Mastodon
• Reddit
• LinkedIn

🪧 Tips

Chat

There are 3 ways to chat with CodeRabbit:

• Review comments: Directly reply to a review comment made by CodeRabbit. Example:
  • I pushed a fix in commit <commit_id>, please review it.
  • Generate unit testing code for this file.
  • Open a follow-up GitHub issue for this discussion.
• Files and specific lines of code (under the "Files changed" tab): Tag @coderabbitai in a new review comment at the desired location with your query. Examples:
  • @coderabbitai generate unit testing code for this file.
  • @coderabbitai modularize this function.
• PR comments: Tag @coderabbitai in a new PR comment to ask questions about the PR branch. For the best results, please provide a very specific query, as very limited context is provided in this mode. Examples:
  • @coderabbitai gather interesting stats about this repository and render them as a table. Additionally, render a pie chart showing the language distribution in the codebase.
  • @coderabbitai read src/utils.ts and generate unit testing code.
  • @coderabbitai read the files in the src/scheduler package and generate a class diagram using mermaid and a README in the markdown format.
  • @coderabbitai help me debug CodeRabbit configuration file.

Note: Be mindful of the bot's finite context window. It's strongly recommended to break down tasks such as reading entire modules into smaller chunks. For a focused discussion, use review comments to chat about specific files and their changes, instead of using the PR comments.

CodeRabbit Commands (Invoked using PR comments)

• @coderabbitai pause to pause the reviews on a PR.
• @coderabbitai resume to resume the paused reviews.
• @coderabbitai review to trigger an incremental review. This is useful when automatic reviews are disabled for the repository.
• @coderabbitai full review to do a full review from scratch and review all the files again.
• @coderabbitai summary to regenerate the summary of the PR.
• @coderabbitai resolve resolve all the CodeRabbit review comments.
• @coderabbitai configuration to show the current CodeRabbit configuration for the repository.
• @coderabbitai help to get help.

Other keywords and placeholders

• Add @coderabbitai ignore anywhere in the PR description to prevent this PR from being reviewed.
• Add @coderabbitai summary to generate the high-level summary at a specific location in the PR description.
• Add @coderabbitai anywhere in the PR title to generate the title automatically.

CodeRabbit Configuration File (.coderabbit.yaml)

• You can programmatically configure CodeRabbit by adding a .coderabbit.yaml file to the root of your repository.
• Please see the configuration documentation for more information.
• If your editor has YAML language server enabled, you can add the path at the top of this file to enable auto-completion and validation: # yaml-language-server: $schema=https://coderabbit.ai/integrations/schema.v2.json

Documentation and Community

• Visit our Documentation for detailed information on how to use CodeRabbit.
• Join our Discord Community to get help, request features, and share feedback.
• Follow us on X/Twitter for updates and announcements.