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Update pbsv to 2.10.0 #51741

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Update pbsv to 2.10.0 #51741

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Update pbsv: 2.9.02.10.0

install with bioconda Conda

Info Link or Description
Recipe recipes/pbsv (click to view/edit other files)
Summary pbsv - PacBio structural variant (SV) calling and analysis tools
Home https://github.com/PacificBiosciences/pbbioconda
Releases
Recipe Maintainer(s) @armintoepfer, @pb-dseifert
Author @PacificBiosciences

This pull request was automatically generated (see docs).

@BiocondaBot BiocondaBot added autobump Automatic Version Update new version labels Oct 28, 2024
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coderabbitai bot commented Oct 28, 2024

📝 Walkthrough

Walkthrough

The pull request involves updates to the meta.yaml file for the pbsv package. The version number has been incremented from "2.9.0" to "2.10.0", and the SHA256 checksum has been changed from "3daf41d28f5d0063f68c49ce790ab17b648f1d2459122f5c13704598342db97c" to "5b640017716efb2d30a75f5af5fd566eae8ee4d6b9517c0a903296b7d298121c". A new section has been added under build, which specifies run_exports with a pin for the pbsv subpackage, enhancing dependency management. Additionally, the about section has been updated to include a new dev_url field that points to the development repository. There are no other structural changes to the file, and the overall format remains consistent with the previous version.

Possibly related PRs

  • Update pbskera to 1.3.0 #51734: This PR updates the pbskera package, which is related to the pbsv package, both developed by Pacific Biosciences, and involves changes to the version and SHA256 checksum in the meta.yaml file.

📜 Recent review details

Configuration used: CodeRabbit UI
Review profile: CHILL

📥 Commits

Files that changed from the base of the PR and between 98e6ec8 and 48c1f3d.

📒 Files selected for processing (1)
  • recipes/pbsv/meta.yaml (3 hunks)
🔇 Additional comments (3)
recipes/pbsv/meta.yaml (3)

16-17: LGTM! Good addition of run_exports.

The addition of run_exports with max_pin="x" is a good practice. This ensures that dependent packages will maintain ABI compatibility by only allowing updates within the same major version.


27-27: LGTM! Good addition of development URL.

The addition of dev_url improves package metadata by providing users with a direct link to the development repository.


2-3: Verify checksum against official release.

The version bump and checksum update appear correct, but let's verify the checksum matches the official release.


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@jmattick
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Please see this PR: #51738

@BiocondaBot BiocondaBot deleted the bump/pbsv branch October 29, 2024 20:15
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