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Update seqscreen meta.yaml #51845

Merged
merged 2 commits into from
Oct 31, 2024
Merged

Update seqscreen meta.yaml #51845

merged 2 commits into from
Oct 31, 2024

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rdoughty10
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Updated versions to not be static, nf restrained to DSL1 versions

Updated versions to not be static, nf restrained to DSL1 versions
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coderabbitai bot commented Oct 31, 2024

📝 Walkthrough
📝 Walkthrough

Walkthrough

The pull request updates the meta.yaml file for the seqscreen package, focusing on the versioning of its dependencies. Key modifications include an increment of the build number from 0 to 1. The nextflow dependency is changed from a fixed version of 21.10.6 to a flexible range of >=22.0.0,<22.11. The ncbi-datasets-cli dependency is updated from a fixed version of 13.20.1 to a minimum version of >=13.20.1. Additionally, the bwa and pyfasta dependencies are updated from fixed versions 0.7.17 and 0.5.2 to minimum versions >=0.7.17 and >=0.5.2, respectively. These changes reflect a shift towards more flexible versioning for the dependencies specified in the meta.yaml.

Possibly related PRs

  • Update meta.yaml for spec2vec #49857: This PR updates the meta.yaml file for the spec2vec package, including changes to dependency versions, similar to the updates made in the seqscreen package's meta.yaml.
  • Update meta.yaml #51213: This PR modifies the meta.yaml file for the RSeQC package, which includes updates to the build number and dependencies, paralleling the changes in the seqscreen PR.
  • Update matchms dependencies #51552: This PR updates the meta.yaml for the matchms package, including changes to dependency versions and build numbers, which aligns with the versioning updates in the seqscreen PR.
  • Update seismic-rna dependencies #51693: This PR updates the meta.yaml for the seismic-rna package, including changes to the build number and dependencies, reflecting a similar approach to the updates in the seqscreen PR.

Suggested labels

please review & merge, new version

Suggested reviewers

  • martin-g

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📥 Commits

Reviewing files that changed from the base of the PR and between 48c47c6 and b8d2799.

📒 Files selected for processing (1)
  • recipes/seqscreen/meta.yaml (3 hunks)
🚧 Files skipped from review as they are similar to previous changes (1)
  • recipes/seqscreen/meta.yaml

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@rdoughty10
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@BiocondaBot please add label

@BiocondaBot BiocondaBot added the please review & merge set to ask for merge label Oct 31, 2024
@bkille bkille merged commit a99ab47 into bioconda:master Oct 31, 2024
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