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Update deepchopper-cli to 1.2.6 #51953

Merged
merged 3 commits into from
Nov 6, 2024
Merged

Update deepchopper-cli to 1.2.6 #51953

merged 3 commits into from
Nov 6, 2024

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Update deepchopper-cli: 1.2.51.2.6

install with bioconda Conda

Info Link or Description
Recipe recipes/deepchopper-cli (click to view/edit other files)
Summary A CLI for Genomic Language Model for Chimera Artifact Detection in Nanopore Direct RNA Sequencing.
Home https://github.com/ylab-hi/DeepChopper
Releases https://pypi.org/pypi/deepchopper_cli/json
Recipe Maintainer(s) @yangyangli

This pull request was automatically generated (see docs).

@BiocondaBot BiocondaBot added autobump Automatic Version Update new version labels Nov 5, 2024
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coderabbitai bot commented Nov 5, 2024

📝 Walkthrough
📝 Walkthrough
📝 Walkthrough

Walkthrough

The pull request involves an update to the meta.yaml file for the deepchopper-cli package. The version number has been incremented from "1.2.5" to "1.2.6", reflecting a new release of the software. Alongside the version change, the SHA256 checksum has also been updated from "fc5ceaf204f82eeae1b82488ee44d020c66b0df13d27a86658ed86a7b1774dbb" to "2ea385c3bb6e95f2d76627c2c6a859cfdab7f3402bd4589b1e787d301df1fbd1". These modifications are essential for maintaining accurate versioning and checksum verification for the package source, ensuring that the new release is properly documented and verifiable.

Additionally, the build.sh script has been modified to enhance functionality and error handling. The script now specifies the Python interpreter using the variable ${PYTHON} instead of a hardcoded value, adds the --strip option to the maturin build command, and modifies the pip install command to include --no-build-isolation and --no-cache-dir options, along with increasing the verbosity level from -vv to -vvv.

Possibly related PRs

  • Add deepchopper-cli  #51780: This PR adds the deepchopper-cli package, which is directly related to the main PR that updates the version of the deepchopper-cli package from "1.2.5" to "1.2.6".
  • Update Deepchopper #51814: This PR updates the deepchopper package to include a runtime requirement for deepchopper-cli >=1.2.5, indicating a direct dependency on the version being updated in the main PR.
  • Update deepchopper to 1.2.5 #51752: This PR updates the deepchopper package version from "1.2.4" to "1.2.5", which is the version that the main PR is incrementing to "1.2.6".

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@mencian mencian merged commit 4c12ca9 into master Nov 6, 2024
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@mencian mencian deleted the bump/deepchopper_cli branch November 6, 2024 03:12
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