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Update muscle to 5.3 #52036

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Nov 11, 2024
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11 changes: 8 additions & 3 deletions recipes/muscle/meta.yaml
Original file line number Diff line number Diff line change
@@ -1,13 +1,13 @@
{% set name = "muscle" %}
{% set version = "5.2" %}
{% set version = "5.3" %}

package:
name: {{ name|lower }}
version: {{ version }}

source:
url: https://github.com/rcedgar/muscle/archive/refs/tags/v{{ version }}.tar.gz
sha256: 7aff1473241a36da94a88f37920a343fae91d2b6faae22e15c06591d1d0339b6
sha256: 74b22a94e630b16015c2bd9ae83aa2be2c2048d3e41f560b2d4a954725c81968
patches:
- support-linux-aarch64.patch

Expand All @@ -21,11 +21,16 @@ requirements:
build:
- {{ compiler('cxx') }}
- llvm-openmp # [osx]
- macports-legacy-support # [osx]
- make

test:
files:
- test_data.fna
commands:
- muscle -version
- muscle --version
- muscle --help

about:
home: https://github.com/rcedgar/muscle
license: GPL-3.0-only
Expand Down
5 changes: 5 additions & 0 deletions recipes/muscle/run_test.sh
Original file line number Diff line number Diff line change
@@ -0,0 +1,5 @@
#!/bin/bash

muscle -msastats test_data.fna
muscle -super5 test_data.fna -output test_output.fna
cat test_output.fna
6 changes: 6 additions & 0 deletions recipes/muscle/test_data.fna
Original file line number Diff line number Diff line change
@@ -0,0 +1,6 @@
>1
GKGDP
>2
MQDRVK
>3
IKKPL