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memgonzales authored Aug 17, 2024
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We also release a [dataset of protein structures](https://doi.org/10.5281/zenodo.11202338), computationally predicted via [ColabFold](https://doi.org/10.1038/s41592-022-01488-1), of 19,081 non-redundant (i.e., with duplicates removed) receptor-binding proteins from 8,525 phages across 238 host genera. We identified these receptor-binding proteins based on GenBank annotations. For phage sequences without GenBank annotations, we employed a pipeline that uses the viral protein library [PHROG](https://doi.org/10.1093/nargab/lqab067) and the machine learning model [PhageRBPdetect](https://doi.org/10.3390/v14061329).

_Return to [Table of Contents](https://github.com/bioinfodlsu/PHIStruct?tab=readme-ov-file#table-of-contents)._

## 🧪 Reproducing Our Results

### Project Structure
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