Regulated Cell Death Playground

Collection of analysis scripts and notebooks related to regulated cell death

🚀 Quick Start

Visit https://bioinfodlsu.com/regulated-cell-death-playground/ for a description of the analysis notebooks.

If you want to replicate the analyses:

1. Install R.
2. Most IDEs like RStudio will automatically prompt you to install the required dependencies when you open a notebook. These dependencies are typically downloaded via CRAN.
3. However, some bioinformatics-specific dependencies are not available at CRAN and have to be downloaded using Bioconductor. To download these bioinformatics-specific dependencies in one go, run install-dependencies.r

💻 Authors

• Mark Edward M. Gonzales
  gonzales.markedward@gmail.com

• Kim Williame Lee
  kim_leejra@dlsu.edu.ph

• Dr. Anish M.S. Shrestha
  anish.shrestha@dlsu.edu.ph

This is part of the "Investigating regulated necrotic cell death in colorectal cancer using a multi-omics approach" project funded by the Department of Science and Technology – Philippine Council for Health Research and Development (DOST-PCHRD). This project is led by Dr. Rafael A. Espiritu of the Department of Chemistry, College of Science, De La Salle University.