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# **Nextflow fundamentals training**
# Nextflow fundamentals training

Is your code reusable? Are your results reproducible? Tired of reinventing the wheel? The thing is that reproducibility and even repeatability is challenging even if you are very careful about keeping the same software parameters and versions. Do you want to learn how to write reusable, reproducible, and scalable pipelines?

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## Nextflow training notes

Welcome to the notes for the Nextflow training offered to the researchers of DTU - Biosustain and DTU - Bioengineering. This course is half dedicated to explain Nextflow fundamentals and half dedicated to practice Nextflow. The materials are based mostly on [Nextflow trainings portal](https://training.nextflow.io/).
Welcome to the notes for the Nextflow training offered to the researchers of DTU - Biosustain and DTU - Bioengineering. This course is half dedicated to explain Nextflow fundamentals and half dedicated to practice Nextflow. The materials are adapted from the [Nextflow trainings portal](https://training.nextflow.io/).

Please visit [About](https://biosustain.github.io/dsp_nextflow_training/about.html) to know about the course, the Data Science platform and what the course covers, go to Course Information to figure out about the details ([instructions](https://biosustain.github.io/dsp_nextflow_training/course_information/Instructions.html), [location](https://biosustain.github.io/dsp_nextflow_training/course_information/Location.html) and [timing](https://biosustain.github.io/dsp_nextflow_training/course_information/Timing.html)). Please visit Instructions first before starting the hands-on part. Once you have started your Codespace, please follow course along in the Course contents. To keep learning Nextflow and nf-core pipelines please visit [Resources](https://biosustain.github.io/dsp_nextflow_training/resources.html).
Please visit [About](https://biosustain.github.io/dsp_nextflow_training/about.html) to know about the course, the Data Science platform and what the course covers, go to Course Information to figure out about the ([instructions](https://biosustain.github.io/dsp_nextflow_training/course_information/Instructions.html), [location](https://biosustain.github.io/dsp_nextflow_training/course_information/Location.html) and [timing](https://biosustain.github.io/dsp_nextflow_training/course_information/Timing.html)). Please visit Instructions first before starting the hands-on part. Once you have started your Codespace, please follow the [tutotial](https://biosustain.github.io/dsp_nextflow_training/course_contents/Tutorial.html) in the Course contents. Running a [Real Workflow](https://biosustain.github.io/dsp_nextflow_training/course_contents/RunningRealWorkflow.html) and the use of [Seqera Platform](https://biosustain.github.io/dsp_nextflow_training/course_contents/SeqeraPlatform.html) is going to be more like a demo than hands-on but you are welcome to try to follow along with the instructors.

And remember to ask questions during the course or after the course, you can contact us at [Data Science platform email](mailto:datascience@biosustain.dtu.dk).
To keep learning Nextflow and nf-core pipelines please visit [Resources](https://biosustain.github.io/dsp_nextflow_training/resources.html).

And remember to ask questions during the course or after the course, you can always contact us at [Data Science platform email](mailto:datascience@biosustain.dtu.dk).

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