Fixed contents links, added dots at the end of lines in RunningRealWo…

…rkflow

course_contents/Contents.md

@@ -1,9 +1,9 @@
 # Contents
 
-To follow the introduction to Nextflow you can download this [powerpoint](https://biosustain.github.io/dsp_nextflow_training/course_contents/blob/main/IntroNextflowFundamentals.pptx"). If you prefer it in pdf click in this link: <https://biosustain.github.io/dsp_nextflow_training/course_contents/blob/main/IntroNextflowFundamentals.pdf>
+To follow the introduction to Nextflow you can download this [powerpoint](course_contents/IntroNextflowFundamentals.pptx"). If you prefer it in pdf click in this link: <course_contents/IntroNextflowFundamentals.pdf>
 
 To follow the hands-on tutorial click [here](https://biosustain.github.io/dsp_nextflow_training/course_contents/Tutorial.html).
 
-To try to run an RNA-Seq data processing pipeline follow instructions [here](https://biosustain.github.io/dsp_nextflow_training/course_contents/RunningRealWorkflow.html)
+To try to run an RNA-Seq data processing pipeline follow instructions [here](https://biosustain.github.io/dsp_nextflow_training/course_contents/RunningRealWorkflow.html).
 
-To run your first Nextflow script and follow the results and logs through Seqera platform go [here](https://biosustain.github.io/dsp_nextflow_training/course_contents/SeqeraPlatform.html)
+To run your first Nextflow script and follow the results and logs through Seqera platform go [here](https://biosustain.github.io/dsp_nextflow_training/course_contents/SeqeraPlatform.html).

course_contents/RunningRealWorkflow.md

@@ -15,4 +15,10 @@ In this part of the tutorial you can also see that Nextflow allows the execution
 
 ```groovy
 nextflow run nextflow-io/rnaseq-nf -with-docker
+```
+
+In order to avoid to add the option `-with-docker` add the following line in the `nextflow.config` file: 
+```{code-block}groovy
+:caption: nextflow.config
+docker.enabled = true
 ```