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Refactor interface to RCSB search API #466

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merged 8 commits into from
Mar 18, 2023
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This PR makes the following changes to biotite.structure.database.rcsb search() and count():

  • Add support for computational structures (e.g. from Alphafold DB) via the content_types parameter. This ability should work well with fetch data from EBI AlphaFold database #465 .
  • Add support for grouping via the new group_by and return_groups parameters. The type of grouping is selected via Grouping subclasses. This resolves RCSB API group by function #411 .
  • Add support for ascending sorting with the Sorting class.

@padix-key padix-key merged commit ac6fb84 into biotite-dev:master Mar 18, 2023
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RCSB API group by function
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