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attempt to fix r build 3.6 and 4.1 issue
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bbitarello committed Apr 24, 2024
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1 change: 1 addition & 0 deletions .Rbuildignore
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Expand Up @@ -43,3 +43,4 @@ README\.html
^codecov\.yml$
^inst/balselr_win_test\.R$
^README\.Rmd$
^data-raw$
4 changes: 3 additions & 1 deletion DESCRIPTION
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Expand Up @@ -28,6 +28,8 @@ Suggests:
testthat,
DT,
rmarkdown,
roxygen2
roxygen2,
rcmdcheck,
remotes
VignetteBuilder: knitr
URL: https://bitarellolab.github.io/balselr/
17 changes: 8 additions & 9 deletions README.Rmd
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Expand Up @@ -6,27 +6,26 @@ output: github_document

```{r, include = FALSE}
knitr::opts_chunk$set(
collapse = TRUE,
comment = "#>",
fig.path = "man/figures/README-",
out.width = "100%"
collapse = TRUE,
comment = "#>",
fig.path = "man/figures/README-",
out.width = "100%"
)
```

# balselr
![](man/figures/balselr.png){width=40% height=40%}


<!-- badges: start -->
![](images/balselr.png){width=40% height=40%}
[![R-CMD-check](https://github.com/bitarellolab/balselr/actions/workflows/R-CMD-check.yaml/badge.svg)](https://github.com/bitarellolab/balselr/actions/workflows/R-CMD-check.yaml)

[![R-CMD-check](https://github.com/bitarellolab/balselr/.github/workflows/R-CMD-check.yaml/badge.svg)](https://github.com/bitarellolab/balselr/.github/workflows/R-CMD-check.yaml)
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### What is `balselr`?
## What is `balselr`?

Balancing selection with R allows you to run **NCD statistics** to detect **long-term balancing selection** in genomic datasets.

Original paper describing the NCD statistics: Bitarello, De Filippo, Teixeira, Schmidt, Kleinert, Meyer & Andrés (2018). Signatures of long-term balancing selection in human genomes. Genome biology and evolution, 10(3), 939-955. [link](https://academic.oup.com/gbe/article/10/3/939/4938688)
Original paper describing the NCD statistics: Bitarello, De Filippo, Teixeira, Schmidt, Kleinert, Meyer & Andrés (2018). Signatures of long-term balancing selection in human genomes. Genome biology and evolution, 10(3), 939-955. [Link](https://academic.oup.com/gbe/article/10/3/939/4938688)

## Installation

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9 changes: 4 additions & 5 deletions README.md
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<!-- README.md is generated from README.Rmd. Please edit that file -->

# balselr
<img src="man/figures/balselr.png" style="width:40.0%;height:40.0%" />

<!-- badges: start -->

<img src="images/balselr.png" style="width:40.0%;height:40.0%" />
[![R-CMD-check](https://github.com/bitarellolab/balselr/actions/workflows/R-CMD-check.yaml/badge.svg)](https://github.com/bitarellolab/balselr/actions/workflows/R-CMD-check.yaml)

[![R-CMD-check](https://github.com/bitarellolab/balselr/.github/workflows/R-CMD-check.yaml/badge.svg)](https://github.com/bitarellolab/balselr/.github/workflows/R-CMD-check.yaml)
<!-- badges: end -->

### What is `balselr`?
## What is `balselr`?

Balancing selection with R allows you to run **NCD statistics** to
detect **long-term balancing selection** in genomic datasets.
Expand All @@ -19,7 +18,7 @@ Original paper describing the NCD statistics: Bitarello, De Filippo,
Teixeira, Schmidt, Kleinert, Meyer & Andrés (2018). Signatures of
long-term balancing selection in human genomes. Genome biology and
evolution, 10(3), 939-955.
[link](https://academic.oup.com/gbe/article/10/3/939/4938688)
[Link](https://academic.oup.com/gbe/article/10/3/939/4938688)

## Installation

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