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matlib

A Matlab general library. Here's a sampling of tools split across several folders/categories:

general

tools useful in general matlab code (or if they didn't fit elsewhere)
Examples: sys.whos for a more powerful version of whos, bw2sdtrf to compute a signed distance transform from a bw image, dice to compute a Dice measure between images, cellfunc to return a cell when doing cellfun behavior, meanShift for (single mode) mean shift estimate, and many more

visual

tools for image and video code
Examples: frames2vid to write a video file from frames, volresize to resize a n-d volume, volblur to blur a n-d volume with separable filters, volwarp warp a n-dim volume via displacement fields, and many more

medimg

tools for medical imaging processing code
Examples: loadNii to load nifti files robustly, toIsotropic transform original resolution volume to isotropic volume, and many more

genetics

tools for geneticts and epigenetics code
Examples: manhattanSNP for manhatten plots of SNPs, or simulation folder for simulation of imaging genetics datasets, and many more

License:

MIT License

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Matlab library of useful tools

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  • MATLAB 99.9%
  • Shell 0.1%