Bump the deps group with 3 updates

[dependabot]

Bumps the deps group with 3 updates: numpy, pytest and ruff.

Updates numpy from 2.0.0 to 2.0.1

Release notes

Sourced from numpy's releases.

v2.0.1

NumPy 2.0.1 Release Notes

NumPy 2.0.1 is a maintenance release that fixes bugs and regressions discovered after the 2.0.0 release. NumPy 2.0.1 is the last planned release in the 2.0.x series, 2.1.0rc1 should be out shortly.

The Python versions supported by this release are 3.9-3.12.

NOTE: Do not use the GitHub generated "Source code" files listed in the "Assets", they are garbage.

Improvements

np.quantile with method closest_observation chooses nearest even order statistic

This changes the definition of nearest for border cases from the nearest odd order statistic to nearest even order statistic. The numpy implementation now matches other reference implementations.

(gh-26656)

Contributors

A total of 15 people contributed to this release. People with a "+" by their names contributed a patch for the first time.

• @​vahidmech +
• Alex Herbert +
• Charles Harris
• Giovanni Del Monte +
• Leo Singer
• Lysandros Nikolaou
• Matti Picus
• Nathan Goldbaum
• Patrick J. Roddy +
• Raghuveer Devulapalli
• Ralf Gommers
• Rostan Tabet +
• Sebastian Berg
• Tyler Reddy
• Yannik Wicke +

Pull requests merged

A total of 24 pull requests were merged for this release.

• #26711: MAINT: prepare 2.0.x for further development
• #26792: TYP: fix incorrect import in ma/extras.pyi stub
• #26793: DOC: Mention '1.25' legacy printing mode in set_printoptions
• #26794: DOC: Remove mention of NaN and NAN aliases from constants

... (truncated)

Commits

• 4c9f431 Merge pull request #27000 from charris/prepare-2.0.1
• 0e70e00 REL: Prepare for the NumPy 2.0.1 release [wheel build]
• 4d10ffc Merge pull request #26995 from charris/backport-26985
• 764b667 BUG: Add object cast to avoid warning with limited API
• 9be6ad6 Merge pull request #26971 from charris/backport-26935
• 6d950e9 BUG: fix f2py tests to work with v2 API
• 89630c0 Merge pull request #26962 from charris/backport-26919
• 88fa840 TST: Apply test suggestion by Nathan for rlstrip fixes
• a9da01e BUG,MAINT: Fix utf-8 character stripping memory access
• 6afbbf8 Merge pull request #26963 from charris/backport-26930
• Additional commits viewable in compare view

Updates pytest from 8.2.2 to 8.3.1

Release notes

Sourced from pytest's releases.

8.3.1

pytest 8.3.1 (2024-07-20)

The 8.3.0 release failed to include the change notes and docs for the release. This patch release remedies this. There are no other changes.

8.3.0

pytest 8.3.0 (2024-07-20)

New features

• #12231: Added [--xfail-tb]{.title-ref} flag, which turns on traceback output for XFAIL results.

  • If the [--xfail-tb]{.title-ref} flag is not given, tracebacks for XFAIL results are NOT shown.
  • The style of traceback for XFAIL is set with [--tb]{.title-ref}, and can be [auto|long|short|line|native|no]{.title-ref}.
  • Note: Even if you have [--xfail-tb]{.title-ref} set, you won't see them if [--tb=no]{.title-ref}.

  Some history:

  With pytest 8.0, [-rx]{.title-ref} or [-ra]{.title-ref} would not only turn on summary reports for xfail, but also report the tracebacks for xfail results. This caused issues with some projects that utilize xfail, but don't want to see all of the xfail tracebacks.

  This change detaches xfail tracebacks from [-rx]{.title-ref}, and now we turn on xfail tracebacks with [--xfail-tb]{.title-ref}. With this, the default [-rx]{.title-ref}/ [-ra]{.title-ref} behavior is identical to pre-8.0 with respect to xfail tracebacks. While this is a behavior change, it brings default behavior back to pre-8.0.0 behavior, which ultimately was considered the better course of action.

• #12281: Added support for keyword matching in marker expressions.

  Now tests can be selected by marker keyword arguments. Supported values are int{.interpreted-text role="class"}, (unescaped) str{.interpreted-text role="class"}, bool{.interpreted-text role="class"} & None{.interpreted-text role="data"}.

  See marker examples <marker_keyword_expression_example>{.interpreted-text role="ref"} for more information.

  -- by lovetheguitar{.interpreted-text role="user"}

• #12567: Added --no-fold-skipped command line option.

  If this option is set, then skipped tests in short summary are no longer grouped by reason but all tests are printed individually with their nodeid in the same way as other statuses.

  -- by pbrezina{.interpreted-text role="user"}

Improvements in existing functionality

• #12469: The console output now uses the "third-party plugins" terminology, replacing the previously established but confusing and outdated reference to setuptools <setuptools:index>{.interpreted-text role="std:doc"} -- by webknjaz{.interpreted-text role="user"}.

• #12544, #12545: Python virtual environment detection was improved by checking for a pyvenv.cfg{.interpreted-text role="file"} file, ensuring reliable detection on various platforms -- by zachsnickers{.interpreted-text role="user"}.

... (truncated)

Commits

• de98446 Prepare release version 8.3.1
• bd0a042 Merge pull request #12636 from pytest-dev/update-release-notes
• 664325b doc/changelog: update 8.3.0 notes
• 19d225d Merge pull request #12635 from pytest-dev/release-8.3.0
• bc33028 Prepare release version 8.3.0
• a7d5a8e Merge pull request #12557 from x612skm/maintainence/11771-pypy-3.9-bump
• ced7072 Add a change note for PR #11771
• d42b76d Adjust test_errors_in_xfail_skip_expressions for PyPy
• 9eee45a Bump PyPy runtime to v3.9 @ GHA
• d489247 Fix caching of parameterized fixtures (#12600)
• Additional commits viewable in compare view

Updates ruff from 0.5.2 to 0.5.4

Release notes

Sourced from ruff's releases.

0.5.4

Release Notes

Rule changes

• [ruff] Rename RUF007 to zip-instead-of-pairwise (#12399)

Bug fixes

• [flake8-builtins] Avoid shadowing diagnostics for @override methods (#12415)
• [flake8-comprehensions] Insert parentheses for multi-argument generators (#12422)
• [pydocstyle] Handle escaped docstrings within docstring (D301) (#12192)

Documentation

• Fix GitHub link to Neovim setup (#12410)
• Fix output-format default in settings reference (#12409)

Install ruff 0.5.4

Install prebuilt binaries via shell script

curl --proto '=https' --tlsv1.2 -LsSf https://github.com/astral-sh/ruff/releases/download/0.5.4/ruff-installer.sh | sh

Install prebuilt binaries via powershell script

powershell -c "irm https://github.com/astral-sh/ruff/releases/download/0.5.4/ruff-installer.ps1 | iex"

Download ruff 0.5.4

File	Platform	Checksum
ruff-aarch64-apple-darwin.tar.gz	Apple Silicon macOS	checksum
ruff-x86_64-apple-darwin.tar.gz	Intel macOS	checksum
ruff-aarch64-pc-windows-msvc.zip	ARM64 Windows	checksum
ruff-i686-pc-windows-msvc.zip	x86 Windows	checksum
ruff-x86_64-pc-windows-msvc.zip	x64 Windows	checksum
ruff-aarch64-unknown-linux-gnu.tar.gz	ARM64 Linux	checksum
ruff-i686-unknown-linux-gnu.tar.gz	x86 Linux	checksum
ruff-powerpc64-unknown-linux-gnu.tar.gz	PPC64 Linux	checksum
ruff-powerpc64le-unknown-linux-gnu.tar.gz	PPC64LE Linux	checksum
ruff-s390x-unknown-linux-gnu.tar.gz	S390x Linux	checksum
ruff-x86_64-unknown-linux-gnu.tar.gz	x64 Linux	checksum
ruff-armv7-unknown-linux-gnueabihf.tar.gz	ARMv7 Linux	checksum
ruff-aarch64-unknown-linux-musl.tar.gz	ARM64 MUSL Linux	checksum
ruff-i686-unknown-linux-musl.tar.gz	x86 MUSL Linux	checksum

... (truncated)

Changelog

Sourced from ruff's changelog.

0.5.4

Rule changes

• [ruff] Rename RUF007 to zip-instead-of-pairwise (#12399)

Bug fixes

• [flake8-builtins] Avoid shadowing diagnostics for @override methods (#12415)
• [flake8-comprehensions] Insert parentheses for multi-argument generators (#12422)
• [pydocstyle] Handle escaped docstrings within docstring (D301) (#12192)

Documentation

• Fix GitHub link to Neovim setup (#12410)
• Fix output-format default in settings reference (#12409)

0.5.3

Ruff 0.5.3 marks the stable release of the Ruff language server and introduces revamped documentation, including setup guides for your editor of choice and the language server itself.

Preview features

• Formatter: Insert empty line between suite and alternative branch after function/class definition (#12294)
• [pyupgrade] Implement unnecessary-default-type-args (UP043) (#12371)

Rule changes

• [flake8-bugbear] Detect enumerate iterations in loop-iterator-mutation (B909) (#12366)
• [flake8-bugbear] Remove discard, remove, and pop allowance for loop-iterator-mutation (B909) (#12365)
• [pylint] Allow repeated-equality-comparison for mixed operations (PLR1714) (#12369)
• [pylint] Ignore self and cls when counting arguments (PLR0913) (#12367)
• [pylint] Use UTF-8 as default encoding in unspecified-encoding fix (PLW1514) (#12370)

Server

• Build settings index in parallel for the native server (#12299)
• Use fallback settings when indexing the project (#12362)
• Consider --preview flag for server subcommand for the linter and formatter (#12208)

Bug fixes

• [flake8-comprehensions] Allow additional arguments for sum and max comprehensions (C419) (#12364)
• [pylint] Avoid dropping extra boolean operations in repeated-equality-comparison (PLR1714) (#12368)
• [pylint] Consider expression before statement when determining binding kind (PLR1704) (#12346)

Documentation

... (truncated)

Commits

• 53b84ab Cleanup redundant spaces from changelog (#12424)
• 3664f85 Bump version to v0.5.4 (#12423)
• 2c1926b Insert parentheses for multi-argument generators (#12422)
• 4bcc96a Avoid shadowing diagnostics for @override methods (#12415)
• c0a2b49 Fix the Github link error for Neovim in the setup for editors in the docs. (#...
• ca22248 Update docs Settings output-format default (#12409)
• d8cf8ac [red-knot] Resolve symbols from builtins.pyi in the stdlib if they cannot b...
• 1c7b840 [red-knot] fix incremental benchmark (#12400)
• f82bb67 [red-knot] trace file when inferring types (#12401)
• 5f96f69 [red-knot] Fix bug where module resolution would not be invalidated if an ent...
• Additional commits viewable in compare view

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