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bumps version
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brwnj committed Oct 22, 2020
1 parent eda20a2 commit fb00dcd
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Showing 3 changed files with 5 additions and 5 deletions.
2 changes: 1 addition & 1 deletion docker/Dockerfile
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Expand Up @@ -4,6 +4,6 @@ RUN apt-get update && apt-get install -y procps
RUN conda create -n env -c conda-forge python=3.7 numpy>=1.16.2 lzstring>=1.0.4 jinja2>=2.10.1
RUN echo "source activate env" > ~/.bashrc
ENV PATH /opt/conda/envs/env/bin:$PATH
RUN /opt/conda/envs/env/bin/pip install --no-cache-dir covviz==1.2.2
RUN /opt/conda/envs/env/bin/pip install --no-cache-dir covviz==1.3.0
RUN wget -qO /usr/bin/goleft https://github.com/brentp/goleft/releases/download/v0.2.3/goleft_linux64
RUN chmod +x /usr/bin/goleft
4 changes: 2 additions & 2 deletions nextflow.config
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Expand Up @@ -25,7 +25,7 @@ process {
errorStrategy = { task.exitStatus in [1,143,137,104,134,139] ? 'retry' : 'terminate' }
maxRetries = 3
maxErrors = '-1'
container = 'brwnj/covviz:v1.2.2'
container = 'brwnj/covviz:v1.3.0'
withLabel: 'indexcov' {
memory = { 8.GB * task.attempt }
cache = 'deep'
Expand Down Expand Up @@ -62,7 +62,7 @@ manifest {
name = 'brwnj/covviz'
author = 'Joe Brown'
description = "find large, coverage-based variations on chromosomes"
version = '1.2.2'
version = '1.3.0'
nextflowVersion = '>=0.32.0'
homePage = 'https://github.com/brwnj/covviz'
mainScript = 'main.nf'
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4 changes: 2 additions & 2 deletions wdl/covviz.wdl
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Expand Up @@ -18,7 +18,7 @@ task run_indexcov {
cpu: 1
disks: "local-disk " + disk_size + " HDD"
preemptible: 2
docker: "brwnj/covviz:v1.2.1"
docker: "brwnj/covviz:v1.3.0"
}
output {
Array[File] indexcov_pngs = glob("${project}/${project}-indexcov-*.png")
Expand Down Expand Up @@ -62,7 +62,7 @@ task run_covviz {
cpu: 1
disks: "local-disk " + disk_size + " HDD"
preemptible: 2
docker: "brwnj/covviz:v1.2.1"
docker: "brwnj/covviz:v1.3.0"
}
output {
File covviz_report = "covviz_report.html"
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