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Pull requests: bystrogenomics/bystro

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Pull requests list

Bump setuptools from 65.5.1 to 70.0.0 in /python dependencies Pull requests that update a dependency file python Pull requests that update Python code
#548 opened Jul 15, 2024 by dependabot bot Loading…
Add modified Multi-snp and Docstring
#547 opened Jul 13, 2024 by IlhaH Loading…
WIP Started adding converted high dimensional covariance testing
#546 opened Jul 12, 2024 by IlhaH • Draft
[scheduler] Even more resilient perl beanstalkd annotation worker
#545 opened Jul 8, 2024 by akotlar Loading…
@cristinaetrv
8
Update LD clumping to take loci with best p-value per bin.
#539 opened Jun 27, 2024 by cristinaetrv Loading…
Bump scikit-learn from 1.2.2 to 1.5.0 in /python dependencies Pull requests that update a dependency file python Pull requests that update Python code
#531 opened Jun 18, 2024 by dependabot bot Loading…
Issue #501: Add simple parsing function to explode on transcript
#523 opened Jun 8, 2024 by akotlar Loading…
@cristinaetrv
2
[WIP] switch to parallel queries, and write intermediate dataframes to disk
#522 opened Jun 7, 2024 by akotlar Loading…
Adding Documentation to deploy annotator
#495 opened May 9, 2024 by dlin30 Loading…
@dlin30
remove SSR, which is not found in latest clinvar VCF
#455 opened Apr 1, 2024 by akotlar Loading…
[WIP] [annotation] Cleanup IO.pm
#411 opened Feb 20, 2024 by akotlar Loading…
2
Add better squash instructions
#379 opened Jan 30, 2024 by akotlar Loading…
@cristinaetrv
5
Implementing a Spherical Autoencoder [WIP]
#364 opened Dec 20, 2023 by austinTalbot7241993 Loading…
[proteomics] add README
#333 opened Oct 27, 2023 by poneill Loading…
update installation and packaging documentation
#311 opened Oct 21, 2023 by wingolab Loading…
@akotlar
2
[issue/273] Add documentation on delimiters being replaced
#306 opened Oct 19, 2023 by akotlar Loading…
@cristinaetrv
5
Add shellcheck ci
#299 opened Oct 17, 2023 by wingolab • Draft
@akotlar
3
add TESTING.md
#281 opened Sep 29, 2023 by poneill • Draft
1
add code review guidelines
#271 opened Sep 25, 2023 by poneill • Draft
Clean up bystro-utils
#172 opened Jul 23, 2023 by akotlar Loading…
2
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