API client update about Mutation Assessor v4 data and UI changes #5015
Add this suggestion to a batch that can be applied as a single commit.
This suggestion is invalid because no changes were made to the code.
Suggestions cannot be applied while the pull request is closed.
Suggestions cannot be applied while viewing a subset of changes.
Only one suggestion per line can be applied in a batch.
Add this suggestion to a batch that can be applied as a single commit.
Applying suggestions on deleted lines is not supported.
You must change the existing code in this line in order to create a valid suggestion.
Outdated suggestions cannot be applied.
This suggestion has been applied or marked resolved.
Suggestions cannot be applied from pending reviews.
Suggestions cannot be applied on multi-line comments.
Suggestions cannot be applied while the pull request is queued to merge.
Suggestion cannot be applied right now. Please check back later.
Part of: genome-nexus/genome-nexus#753
![image](https://private-user-images.githubusercontent.com/16869603/373402871-47ea869a-01c9-420b-8bbf-caa87e31dc30.png?jwt=eyJhbGciOiJIUzI1NiIsInR5cCI6IkpXVCJ9.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.Xd-7zGXfWuiwjya0z6MC1KXI8JdGJBkE8AX_SG-ZTBg)
![image](https://private-user-images.githubusercontent.com/16869603/373370915-26290356-8d3f-4279-8e0d-634d39f29988.png?jwt=eyJhbGciOiJIUzI1NiIsInR5cCI6IkpXVCJ9.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.BudYckejcUEYlFcfe_TKfEO4MsuEq4wPQoy8-EOVPqA)
There are some API model changes about Mutation Assessor v4 in genome nexus. This pr changes data display and tooltip text to work with new data
Header tooltip:
Data and tooltip:
Test link (need to add Functional Impact in column dropdown): https://deploy-preview-5015.cancerrevue.org/results/mutations?cancer_study_list=msk_impact_2017&Z_SCORE_THRESHOLD=2.0&RPPA_SCORE_THRESHOLD=2.0&profileFilter=mutations%2Cstructural_variants%2Ccna&case_set_id=msk_impact_2017_cnaseq&gene_list=BRAF&geneset_list=%20&tab_index=tab_visualize&Action=Submit