Add integration tests for clickhouse endpoints cna and sv genes #1900
Workflow file for this run
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name: Security integration tests | |
on: [push, pull_request] | |
jobs: | |
build: | |
name: Security integration tests | |
runs-on: ubuntu-latest | |
env: | |
PORTAL_SOURCE_DIR: /home/runner/work/cbioportal/cbioportal/cbioportal | |
PORTAL_COMPOSE_DIR: /home/runner/work/cbioportal/cbioportal/cbioportal-docker-compose | |
PORTAL_INFO_DIR: /home/runner/work/cbioportal/cbioportal/portalInfo | |
steps: | |
- name: 'Checkout cbioportal repo' | |
uses: actions/checkout@v2 | |
with: | |
path: ./cbioportal | |
- name: 'Set up JDK 21' | |
uses: oracle-actions/setup-java@v1 | |
with: | |
website: oracle.com | |
release: 21 | |
- name: 'Cache Maven packages' | |
uses: actions/cache@v1 | |
with: | |
path: ~/.m2 | |
key: ${{ runner.os }}-m2-${{ hashFiles('**/pom.xml') }} | |
restore-keys: ${{ runner.os }}-m2 | |
- name: 'Download Chrome' | |
uses: browser-actions/setup-chrome@latest | |
- name: 'Copy Application.Properties' | |
working-directory: ./cbioportal | |
run: | | |
cp src/main/resources/application.properties.EXAMPLE src/main/resources/application.properties | |
- name: 'Run integration tests' | |
working-directory: ./cbioportal | |
run: | | |
mvn verify -Pintegration-test |