Rename custom_sample_types to custom sample_type_colors

cBioPortal · Aug 30, 2023 · ff70205 · ff70205
1 parent b90dde0
commit ff70205
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Showing 3 changed files with 3 additions and 3 deletions.
diff --git a/core/src/main/java/org/mskcc/cbio/portal/util/GlobalProperties.java b/core/src/main/java/org/mskcc/cbio/portal/util/GlobalProperties.java
@@ -184,7 +184,7 @@ public void setOncoprintClinicalTracksConfigJson(String property) {
     }
 
     private static String skinPatientViewCustomSampleTypesJson;
-    @Value("${skin.patient_view.custom_sample_types_json:}") // default is empty string
+    @Value("${skin.patient_view.custom_sample_type_colors_json:}") // default is empty string
     public void setSkinPatientViewCustomSampleTypesJson(String property) {
         skinPatientViewCustomSampleTypesJson = property; 
     }

diff --git a/docs/deployment/customization/portal.properties-Reference.md b/docs/deployment/customization/portal.properties-Reference.md
@@ -221,7 +221,7 @@ skin.patient_view.structural_variant_table.columns.show_on_init=
 ### Define custom sample type colors
 Define the colors of custom sample types in the patient view using a json object with for each sample type a color:
 ```
-skin.patient_view.custom_sample_types_json=classpath:/skin-patient-view-custom-sample-types.json
+skin.patient_view.custom_sample_type_colors_json=classpath:/skin-patient-view-custom-sample-types.json
 ```
 
 ### Choose the display name for authenticated users

diff --git a/portal/src/main/webapp/config_service.jsp b/portal/src/main/webapp/config_service.jsp
@@ -185,7 +185,7 @@
 
         obj.put("oncoprint_clinical_tracks_config_json",GlobalProperties.getOncoprintClinicalTracksConfigJson());
 
-        obj.put("skin_patient_view_custom_sample_types_json", GlobalProperties.getSkinPatientViewCustomSampleTypesJson());
+        obj.put("skin_patient_view_custom_sample_type_colors_json", GlobalProperties.getSkinPatientViewCustomSampleTypesJson());
 
         obj.put("authenticationMethod",GlobalProperties.authenticationMethod());