Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Added MAPPYACTS cohort #2039

Open
wants to merge 3 commits into
base: master
Choose a base branch
from
Open

Added MAPPYACTS cohort #2039

wants to merge 3 commits into from

Conversation

sbabyanusha
Copy link
Collaborator

@sbabyanusha sbabyanusha commented Jun 17, 2024

Cancer studies updated in this pull request:

checks

For all pull requests:

  • Passes validation

Here are a few notes:

  1. Is this study with or without normals?
  2. The CN genes table is empty. Is that a bug for you as well?
  3. There is a pie chart saying RNA -Seq yes or no, but we are not pulling the data?
  4. what does Contributivity mean?
  5. We can’t get treatment info?

Thanks for the review @ritikakundra

  1. All the WXS samples have matched normals.
  2. It is a hg38 study so the CNA will not show up.
  3. Gene fusions were identified by RNA Seq and no expression data was generated according to the team.
  4. Updated the description.
  5. Treatment was not shared as it was censored.

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

Successfully merging this pull request may close these issues.

1 participant