Hotfix - 1.6.9 - Fix flag order

Manually sort flags output to the filter column as VCF.pm doesn't do it.

Hotfix - 1.6.7 - Added Targeted support

• Added targeted support

Bugfix release - 1.6.5

• Correct bug where sequencing type names in script and config differ

1.6.3

Version bump

1.6.1

* Replaced prerequestite test for Bio::DB::Sam with Bio::DB::HTS in s…

1.6.0 - Feature release

• Now uses UCSC defined types as opposed to genome/exome etc. WXS,WGS,AMPLICON,RNASEQ defined so far
• Uses Bio::DB::HTS rather than Bio::DB::Sam - cram can be used

Hotfix - 1.5.4

• Added UCSC standard sequencing types AMPLICON,WXS and WGS to allowed seq types

Bugfix release - 1.5.2

• Fix to headers where info field soft flags were marked as filter headers.

Feature Release - 1.5.0

• Removes flags before flagging in order to ensure a full reflag is carried out.

Hotfix - v1.4.1

• Version output added