Fix newly added genomes not being added to JBrowse.conf correctly

ccmbioinfo · Dec 15, 2021 · e008ff0 · e008ff0
1 parent 78171dc
commit e008ff0
Showing 1 changed file with 1 addition and 1 deletion.
diff --git a/src/setup/fetch_and_setup_ensembl.py b/src/setup/fetch_and_setup_ensembl.py
@@ -358,7 +358,7 @@ def load_gff_into_JBrowse(root_dir,jbrowse_path, jbrowse_data_directory, jbrowse
             if dataset_id_exists is False:
                 jbrowse_fh.write(dataset_id+"\n")
                 jbrowse_fh.write('url  = ?data='+os.path.basename(jbrowse_data_directory)+"\n")
-                jbrowse_fh.write('name = '+ genome.lower())
+                jbrowse_fh.write('name = '+ genome.lower() + "\n\n")
 
         gRNA_gff = os.path.join(jbrowse_data_directory,"gRNA_CRISPR.gff")
         primer_gff = os.path.join(jbrowse_data_directory,"acceptedPrimers.gff")