Flask: Bump pandas from 1.2.5 to 1.3.0 in /flask

flask/app/routes.py

@@ -21,6 +21,8 @@
 from .extensions import db, oauth
 from .utils import enum_validate, transaction_or_abort, validate_json, update_last_login
 
+import numpy as np
+
 routes = Blueprint("routes", __name__)
 
 
@@ -282,7 +284,7 @@ def bulk_update():
         try:
             app.logger.debug("Reading in csv and converted to a dictionary..")
             dat = pd.read_csv(StringIO(request.data.decode("utf-8")))
-            dat = dat.where(pd.notnull(dat), None)
+            dat = dat.replace({np.nan: None})
             dat = dat.to_dict(orient="records")
         except Exception as err:
             app.logger.error(
@@ -553,6 +555,7 @@ def bulk_update():
         app.logger.debug("\tAdding users groups to the dataset")
         dataset.groups += groups
         app.logger.debug("\tCreating dataset entry in the database..")
+        app.logger.debug(dataset.__dict__)
         db.session.add(dataset)
         transaction_or_abort(db.session.flush)
         app.logger.debug("\tDone")

flask/requirements-dev.txt

@@ -76,7 +76,7 @@ numpy==1.20.2
     # via pandas
 packaging==20.9
     # via pytest
-pandas==1.2.5
+pandas==1.3.0
     # via -r requirements.in
 pathspec==0.8.1
     # via black

flask/requirements.txt

@@ -54,7 +54,7 @@ minio==7.0.4
     # via -r requirements.in
 numpy==1.20.2
     # via pandas
-pandas==1.2.5
+pandas==1.3.0
     # via -r requirements.in
 pycparser==2.20
     # via cffi