chore: formatting

chanzuckerberg · Oct 22, 2024 · b19dd7d · b19dd7d
1 parent d70c05f
commit b19dd7d
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Showing 4 changed files with 3 additions and 2 deletions.
diff --git a/cryoet_data_portal_neuroglancer/precompute/contrast_limits.py b/cryoet_data_portal_neuroglancer/precompute/contrast_limits.py
@@ -523,6 +523,7 @@ def combined_contrast_limit_plot(
 ) -> None:
     """Plot the CDF and the calculated limits."""
     import matplotlib.pyplot as plt
+
     fig, ax = plt.subplots()
 
     ax.plot(cdf[0], cdf[1])

diff --git a/cryoet_data_portal_neuroglancer/utils.py b/cryoet_data_portal_neuroglancer/utils.py
@@ -258,6 +258,7 @@ def get_window_limits_from_contrast_limits(
 
 class ParameterOptimizer:
     """This class requires installatino of hyperopt package, version 0.2.7 or higher"""
+
     def __init__(self, objective):
         self.objective = objective
 

diff --git a/manual_tests/segmentation_from_api.py b/manual_tests/segmentation_from_api.py
@@ -27,7 +27,6 @@ def grab_annotation():
 
 
 def make_precomputed_segmentation():
-
     encode_segmentation(
         zarr_path,
         output_path,

diff --git a/tests/test_shader.py b/tests/test_shader.py
@@ -56,7 +56,7 @@ def test_get_default_image_vr_shader():
 
     contrast_threedee_control = shader_controls[threedee_contrast_name]
     assert contrast_threedee_control["range"] == list(threedee_contrast_limits)
-    assert contrast_threedee_control["window"] == [-5.0, 5.0] # Window bigger than range
+    assert contrast_threedee_control["window"] == [-5.0, 5.0]  # Window bigger than range
 
     checkbox_control = shader_controls[f"invert_{threedee_contrast_name}"]
     assert checkbox_control is True