Add Commit Message Table and Add Commit Messages to Facade Collection

augur/application/db/models/__init__.py

@@ -63,6 +63,7 @@
     PullRequestTeam,
     PullRequestRepo,
     PullRequestReviewMessageRef,
+    CommitMessage,
     RepoClone,
 )
 

augur/application/db/models/augur_data.py

@@ -1350,6 +1350,36 @@ class Commit(Base):
     repo = relationship("Repo", back_populates="commits")
     message_ref = relationship("CommitCommentRef", back_populates="cmt")
 
+class CommitMessage(Base):
+    __tablename__ = "commit_messages"
+    __table_args__ = ( UniqueConstraint("repo_id","cmt_hash", name="commit-message-insert-unique"),
+        { 
+            "schema": "augur_data",
+            "comment": "This table holds commit messages",
+        }
+    )
+
+    cmt_msg_id = Column(
+        BigInteger,
+        primary_key=True,
+        server_default=text("nextval('augur_data.commits_cmt_id_seq'::regclass)"),
+    )
+
+    repo_id = Column(
+        ForeignKey("augur_data.repo.repo_id", ondelete="RESTRICT", onupdate="CASCADE"),
+        nullable=False,
+    )
+
+    cmt_msg = Column(String, nullable=False)
+
+    cmt_hash = Column(String(80), nullable=False)
+
+    tool_source = Column(String)
+    tool_version = Column(String)
+    data_source = Column(String)
+    data_collection_date = Column(
+        TIMESTAMP(precision=0), server_default=text("CURRENT_TIMESTAMP")
+    )
 
 class Issue(Base):
     __tablename__ = "issues"

augur/application/schema/alembic/versions/29_add_commit_message_table.py

@@ -0,0 +1,42 @@
+"""Add commit message table
+
+Revision ID: 29
+Revises: 28
+Create Date: 2024-07-25 12:02:57.185867
+
+"""
+from alembic import op
+import sqlalchemy as sa
+from sqlalchemy.dialects import postgresql
+
+# revision identifiers, used by Alembic.
+revision = '29'
+down_revision = '28'
+branch_labels = None
+depends_on = None
+
+
+def upgrade():
+    # ### commands auto generated by Alembic - please adjust! ###
+    op.create_table('commit_messages',
+    sa.Column('cmt_msg_id', sa.BigInteger(), server_default=sa.text("nextval('augur_data.commits_cmt_id_seq'::regclass)"), nullable=False),
+    sa.Column('repo_id', sa.BigInteger(), nullable=False),
+    sa.Column('cmt_msg', sa.String(), nullable=False),
+    sa.Column('cmt_hash', sa.String(length=80), nullable=False),
+    sa.Column('tool_source', sa.String(), nullable=True),
+    sa.Column('tool_version', sa.String(), nullable=True),
+    sa.Column('data_source', sa.String(), nullable=True),
+    sa.Column('data_collection_date', postgresql.TIMESTAMP(precision=0), server_default=sa.text('CURRENT_TIMESTAMP'), nullable=True),
+    sa.ForeignKeyConstraint(['repo_id'], ['augur_data.repo.repo_id'], onupdate='CASCADE', ondelete='RESTRICT'),
+    sa.PrimaryKeyConstraint('cmt_msg_id'),
+    sa.UniqueConstraint('repo_id', 'cmt_hash', name='commit-message-insert-unique'),
+    schema='augur_data',
+    comment='This table holds commit messages'
+    )
+    # ### end Alembic commands ###
+
+
+def downgrade():
+    # ### commands auto generated by Alembic - please adjust! ###
+    op.drop_table('commit_messages', schema='augur_data')
+    # ### end Alembic commands ###

augur/tasks/git/facade_tasks.py

@@ -2,9 +2,8 @@
 
 import logging
 from celery import group, chain
-import sqlalchemy as s
 
-from augur.application.db.lib import execute_sql, fetchall_data_from_sql_text, get_session, get_repo_by_repo_git, get_repo_by_repo_id, remove_working_commits_by_repo_id_and_hashes, get_working_commits_by_repo_id, facade_bulk_insert_commits
+from augur.application.db.lib import get_session, get_repo_by_repo_git, get_repo_by_repo_id, remove_working_commits_by_repo_id_and_hashes, get_working_commits_by_repo_id, facade_bulk_insert_commits, bulk_insert_dicts
 
 from augur.tasks.git.util.facade_worker.facade_worker.utilitymethods import trim_commits
 from augur.tasks.git.util.facade_worker.facade_worker.utilitymethods import get_absolute_repo_path, get_parent_commits_set, get_existing_commits_set
@@ -23,7 +22,7 @@
 from augur.tasks.init.celery_app import AugurFacadeRepoCollectionTask
 
 
-from augur.application.db.models import Repo, CollectionStatus
+from augur.application.db.models import Repo, CollectionStatus, CommitMessage
 
 from augur.tasks.git.dependency_tasks.tasks import process_dependency_metrics
 from augur.tasks.git.dependency_libyear_tasks.tasks import process_libyear_dependency_metrics
@@ -35,7 +34,7 @@
 #define an error callback for chains in facade collection so facade doesn't make the program crash
 #if it does.
 @celery.task
 def facade_error_handler(request,exc,traceback):
 
     logger = logging.getLogger(facade_error_handler.__name__)
 
@@ -194,7 +193,7 @@
     facade_helper.log_activity('Debug',f"Commits missing from repo {repo_id}: {len(missing_commits)}")
 
 
     if not len(missing_commits) or repo_id is None:
         #session.log_activity('Info','Type of missing_commits: %s' % type(missing_commits))
         return
 
@@ -205,6 +204,7 @@
     repo_loc = (f"{absolute_path}/.git")
 
     pendingCommitRecordsToInsert = []
+    pendingCommitMessageRecordsToInsert = []
 
     for count, commitTuple in enumerate(queue):
         quarterQueue = int(len(queue) / 4)
@@ -217,14 +217,21 @@
             logger.info(f"Progress through current analysis queue is {(count / len(queue)) * 100}%")
 
         #logger.info(f"Got to analysis!")
-        commitRecords = analyze_commit(logger, repo_id, repo_loc, commitTuple)
+        commitRecords, commit_msg = analyze_commit(logger, repo_id, repo_loc, commitTuple)
         #logger.debug(commitRecord)
-        if len(commitRecords):
+        if commitRecords:
             pendingCommitRecordsToInsert.extend(commitRecords)
             if len(pendingCommitRecordsToInsert) >= 1000:
                 facade_bulk_insert_commits(logger,pendingCommitRecordsToInsert)
                 pendingCommitRecordsToInsert = []
+
+        if commit_msg:
+            pendingCommitMessageRecordsToInsert.append(commit_msg)
+
+        if len(pendingCommitMessageRecordsToInsert) >= 1000:
+            bulk_insert_dicts(logger,pendingCommitMessageRecordsToInsert, CommitMessage, ["repo_id","cmt_hash"])
 
+    bulk_insert_dicts(logger,pendingCommitMessageRecordsToInsert, CommitMessage, ["repo_id","cmt_hash"])
     facade_bulk_insert_commits(logger,pendingCommitRecordsToInsert)
 
     # Remove the working commit.

augur/tasks/git/util/facade_worker/facade_worker/analyzecommit.py

@@ -25,7 +25,9 @@
 # and checks for any parents of HEAD that aren't already accounted for in the
 # repos. It also rebuilds analysis data, checks any changed affiliations and
 # aliases, and caches data for display.
+import datetime
 import subprocess
+from subprocess import check_output
 import os
 import sqlalchemy as s
 
@@ -177,6 +179,22 @@ def generate_commit_record(repos_id,commit,filename,
 	#db_local.commit()
 	execute_sql(store_working_commit)
 
+	commit_message = check_output(
+		f"git --git-dir {repo_loc} log --format=%B -n 1 {commit}".split()
+	).strip()
+
+
+	msg_record = {
+		'repo_id' : repo_id,
+		'cmt_msg' : commit_message,
+		'cmt_hash' : commit,
+		'tool_source' : 'Facade',
+		'tool_version' : '0.78?',
+		'data_source' : 'git',
+		'data_collection_date' : datetime.datetime.now().strftime('%Y-%m-%d %H:%M:%S')
+	}
+
+
 	#session.log_activity('Debug',f"Stored working commit and analyzing : {commit}")
 
 	for line in git_log.stdout.read().decode("utf-8",errors="ignore").split(os.linesep):
@@ -314,4 +332,4 @@ def generate_commit_record(repos_id,commit,filename,
 		added,removed,whitespace))
 
 
-	return recordsToInsert
+	return recordsToInsert, msg_record