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Low-memory sequence I/O #118

Merged
merged 6 commits into from
Nov 9, 2017
Merged

Low-memory sequence I/O #118

merged 6 commits into from
Nov 9, 2017

Commits on Nov 1, 2017

  1. Make FASTA read-all-sequences lazy per chromosome

    @totakke
    totakke committed Nov 1, 2017
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  2. Disable chunking of 2bit read-all-sequences

    @totakke
    totakke committed Nov 1, 2017
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  3. Add low-memory write-sequences to 2bit writer

    @totakke
    totakke committed Nov 1, 2017
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  4. Refine medium FASTA and 2bit files

    @totakke
    totakke committed Nov 1, 2017
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  5. Add benchmark of read-all-sequences

    @totakke
    totakke committed Nov 1, 2017
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Commits on Nov 9, 2017

  1. Add primitive hint

    @totakke
    totakke committed Nov 9, 2017
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