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Filter by assemblies length #11

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davidtong28 opened this issue Jul 6, 2023 · 0 comments
Open

Filter by assemblies length #11

davidtong28 opened this issue Jul 6, 2023 · 0 comments
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@aimirza
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enhancement New feature or request

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@davidtong28
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Description of feature

Add a skippable step in post assembly QC to filter out unwanted assembly length. The length may come from the Quast report. This is most useful in WGS of a known species. Parameters should include:
skip_length_filter=True
min_length
max_length
@davidtong28 davidtong28 added the enhancement New feature or request label Jul 6, 2023
@aimirza aimirza self-assigned this Nov 7, 2023
aimirza added a commit that referenced this issue Dec 19, 2023
@aimirza
added seqtk/subseq module for issue #11
69d1588
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@aimirza aimirza

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@aimirza @davidtong28