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Build cando

Build cando #544

Triggered via pull request November 5, 2023 02:19
Status Failure
Total duration 18m 28s
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tests.yml

on: pull_request
Matrix: test-bot
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4 errors and 2 warnings
`brew install --verbose --build-bottle clasp-developers/clasp/cando` failed on macOS Ventura (13)!: Formula/cando.rb#L34
[682/998] Compiling ../extensions/cando/src/chem/cluster.cc [683/998] Compiling ../extensions/cando/src/chem/chemPackage.cc [684/998] Compiling ../extensions/cando/src/chem/matter.cc [685/998] Compiling ../extensions/cando/src/chem/aggregate.cc [686/998] Compiling ../extensions/cando/src/chem/molecule.cc [687/998] Compiling ../extensions/cando/src/chem/residue.cc [688/998] Compiling ../extensions/cando/src/chem/bond.cc [689/998] Compiling ../extensions/cando/src/chem/atomIdMap.cc [690/998] Compiling ../extensions/cando/src/chem/atom.cc [691/998] Compiling ../extensions/cando/src/chem/atomId.cc [692/998] Compiling ../extensions/cando/src/chem/elements.cc [693/998] Compiling ../extensions/cando/src/chem/angle.cc [694/998] Compiling ../extensions/cando/src/chem/restraint.cc [695/998] Compiling ../extensions/cando/src/chem/properTorsion.cc [696/998] Compiling ../extensions/cando/src/chem/improperTorsion.cc [697/998] Compiling ../extensions/cando/src/chem/monomerCoordinates.cc [698/998] Compiling ../extensions/cando/src/chem/minimizer.cc [699/998] Compiling ../extensions/cando/src/chem/topology.cc [700/998] Compiling ../extensions/cando/src/chem/constitution.cc [701/998] Compiling ../extensions/cando/src/chem/entity.cc [702/998] Compiling ../extensions/cando/src/chem/candoDatabase.cc [703/998] Compiling ../extensions/cando/src/chem/rotamer.cc [704/998] Compiling ../extensions/cando/src/chem/atomReference.cc [705/998] Compiling ../extensions/cando/src/chem/frameRecognizer.cc [706/998] Compiling ../extensions/cando/src/chem/constitutionAtoms.cc [707/998] Compiling ../extensions/cando/src/chem/pdbMonomer.cc [708/998] Compiling ../extensions/cando/src/chem/stereoisomerAtoms.cc [709/998] Compiling ../extensions/cando/src/chem/loop.cc [710/998] Compiling ../extensions/cando/src/chem/trajectory.cc [711/998] Compiling ../extensions/cando/src/chem/indirectAtomCoordinateReference.cc [712/998] Compiling ../extensions/cando/src/chem/energyComponent.cc [713/998] Compiling ../extensions/cando/src/chem/maxcliqueseq.cc [714/998] Compiling ../extensions/cando/src/chem/energySketchStretch.cc [715/998] Compiling ../extensions/cando/src/chem/energyStretch.cc [716/998] Compiling ../extensions/cando/src/chem/energyAngle.cc [717/998] Compiling ../extensions/cando/src/chem/energyNonbond.cc [718/998] Compiling ../extensions/cando/src/chem/energyPeriodicBoundaryConditionsNonbond.cc [719/998] Compiling ../extensions/cando/src/chem/energyAnchorRestraint.cc [720/998] Compiling ../extensions/cando/src/chem/energyChiralRestraint.cc [721/998] Compiling ../extensions/cando/src/chem/energyDihedral.cc ../extensions/cando/src/chem/energyDihedral.cc:516:28: warning: loop not vectorized: the optimizer was unable to perform the requested transformation; the transformation might be disabled or specified as part of an unsupported transformation ordering [-Wpass-failed=transform-warning] num_real EnergyDihedral_O::evaluateAllComponentSingle( ^ ../extensions/cando/src/chem/energyDihedral.cc:516:28: note: could not determine the original source location for /usr/local/Cellar/cando/2.4.0-25-g052ac6ed6-g4fa656ce/share/clasp/extensions/cando/src/chem/energyDihedral.cc:582:3 1 warning generated. [722/998] Compiling ../extensions/seqan-clasp/src/seqan.cc [723/998] Compiling ../extensions/cando/src/chem/energyPointToLineRestraint.cc [724/998] Compiling ../extensions/cando/src/chem/energyOutOfZPlane.cc [725/998] Compiling ../extensions/cando/src/chem/energyFixedNonbond.cc [726/998] Compiling ../extensions/cando/src/chem/energyRigidBodyStaple.cc [727/998] Compiling ../extensions/cando/src/chem/energyDihedralRestraint.cc [728/998] Compiling ../extensions/cando/src/chem/energyAtomTable.cc [729/998] Compiling ../extensions/cando/src/chem/scoringFunction.cc [730/998] Compiling ../extensions/cando/src/chem/energyRigidBodyNonbond.cc [731/998] Compiling ../extensions/cando/src/chem/energySketchNonbond.cc [732/998] Compiling ../extensions/cando/src/chem/plug.cc [733/998] Compiling ../exten
test-bot (macos-13)
Process completed with exit code 1.
`brew install --verbose --build-bottle clasp-developers/clasp/cando` failed on macOS Monterey (12)!: Formula/cando.rb#L34
[682/998] Compiling ../extensions/cando/src/chem/cluster.cc [683/998] Compiling ../extensions/cando/src/chem/chemPackage.cc [684/998] Compiling ../extensions/cando/src/chem/matter.cc [685/998] Compiling ../extensions/cando/src/chem/aggregate.cc [686/998] Compiling ../extensions/cando/src/chem/molecule.cc [687/998] Compiling ../extensions/cando/src/chem/residue.cc [688/998] Compiling ../extensions/cando/src/chem/atomIdMap.cc [689/998] Compiling ../extensions/cando/src/chem/atom.cc [690/998] Compiling ../extensions/cando/src/chem/bond.cc [691/998] Compiling ../extensions/cando/src/chem/atomId.cc [692/998] Compiling ../extensions/cando/src/chem/elements.cc [693/998] Compiling ../extensions/cando/src/chem/restraint.cc [694/998] Compiling ../extensions/cando/src/chem/angle.cc [695/998] Compiling ../extensions/cando/src/chem/properTorsion.cc [696/998] Compiling ../extensions/cando/src/chem/improperTorsion.cc [697/998] Compiling ../extensions/cando/src/chem/monomerCoordinates.cc [698/998] Compiling ../extensions/cando/src/chem/minimizer.cc [699/998] Compiling ../extensions/cando/src/chem/topology.cc [700/998] Compiling ../extensions/cando/src/chem/constitution.cc [701/998] Compiling ../extensions/cando/src/chem/entity.cc [702/998] Compiling ../extensions/cando/src/chem/candoDatabase.cc [703/998] Compiling ../extensions/cando/src/chem/rotamer.cc [704/998] Compiling ../extensions/cando/src/chem/atomReference.cc [705/998] Compiling ../extensions/cando/src/chem/frameRecognizer.cc [706/998] Compiling ../extensions/cando/src/chem/constitutionAtoms.cc [707/998] Compiling ../extensions/cando/src/chem/pdbMonomer.cc [708/998] Compiling ../extensions/cando/src/chem/stereoisomerAtoms.cc [709/998] Compiling ../extensions/cando/src/chem/indirectAtomCoordinateReference.cc [710/998] Compiling ../extensions/cando/src/chem/loop.cc [711/998] Compiling ../extensions/cando/src/chem/trajectory.cc [712/998] Compiling ../extensions/cando/src/chem/energyComponent.cc [713/998] Compiling ../extensions/cando/src/chem/maxcliqueseq.cc [714/998] Compiling ../extensions/cando/src/chem/energySketchStretch.cc [715/998] Compiling ../extensions/cando/src/chem/energyStretch.cc [716/998] Compiling ../extensions/cando/src/chem/energyAngle.cc [717/998] Compiling ../extensions/cando/src/chem/energyPeriodicBoundaryConditionsNonbond.cc [718/998] Compiling ../extensions/cando/src/chem/energyNonbond.cc [719/998] Compiling ../extensions/cando/src/chem/energyAnchorRestraint.cc [720/998] Compiling ../extensions/cando/src/chem/energyChiralRestraint.cc [721/998] Compiling ../extensions/cando/src/chem/energyDihedral.cc ../extensions/cando/src/chem/energyDihedral.cc:516:28: warning: loop not vectorized: the optimizer was unable to perform the requested transformation; the transformation might be disabled or specified as part of an unsupported transformation ordering [-Wpass-failed=transform-warning] num_real EnergyDihedral_O::evaluateAllComponentSingle( ^ ../extensions/cando/src/chem/energyDihedral.cc:516:28: note: could not determine the original source location for /usr/local/Cellar/cando/2.4.0-25-g052ac6ed6-g4fa656ce/share/clasp/extensions/cando/src/chem/energyDihedral.cc:582:3 1 warning generated. [722/998] Compiling ../extensions/seqan-clasp/src/seqan.cc [723/998] Compiling ../extensions/cando/src/chem/energyPointToLineRestraint.cc [724/998] Compiling ../extensions/cando/src/chem/energyOutOfZPlane.cc [725/998] Compiling ../extensions/cando/src/chem/energyFixedNonbond.cc [726/998] Compiling ../extensions/cando/src/chem/energyDihedralRestraint.cc [727/998] Compiling ../extensions/cando/src/chem/energyRigidBodyStaple.cc [728/998] Compiling ../extensions/cando/src/chem/energyAtomTable.cc [729/998] Compiling ../extensions/cando/src/chem/scoringFunction.cc [730/998] Compiling ../extensions/cando/src/chem/energyRigidBodyNonbond.cc [731/998] Compiling ../extensions/cando/src/chem/energySketchNonbond.cc [732/998] Compiling ../extensions/cando/src/chem/plug.cc [733/998] Compiling ../exten
test-bot (macos-12)
Process completed with exit code 1.
test-bot (macos-13)
No files were found with the provided path: *.bottle.*. No artifacts will be uploaded.
test-bot (macos-12)
No files were found with the provided path: *.bottle.*. No artifacts will be uploaded.