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Build cando

Build cando #552

Triggered via pull request November 13, 2023 02:19
@yitzchakyitzchak
synchronize #441
build-cando
Status Failure
Total duration 29m 9s
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tests.yml

on: pull_request
Matrix: test-bot
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4 errors and 2 warnings
`brew install --verbose --build-bottle clasp-developers/clasp/cando` failed on macOS Ventura (13)!: Formula/cando.rb#L34
[674/988] Compiling ../extensions/cando/src/chem/cluster.cc [675/988] Compiling ../extensions/cando/src/chem/chemPackage.cc [676/988] Compiling ../extensions/cando/src/chem/matter.cc [677/988] Compiling ../extensions/cando/src/chem/aggregate.cc [678/988] Compiling ../extensions/cando/src/chem/molecule.cc [679/988] Compiling ../extensions/cando/src/chem/residue.cc [680/988] Compiling ../extensions/cando/src/chem/bond.cc [681/988] Compiling ../extensions/cando/src/chem/atom.cc [682/988] Compiling ../extensions/cando/src/chem/atomIdMap.cc [683/988] Compiling ../extensions/cando/src/chem/atomId.cc [684/988] Compiling ../extensions/cando/src/chem/elements.cc [685/988] Compiling ../extensions/cando/src/chem/restraint.cc [686/988] Compiling ../extensions/cando/src/chem/angle.cc [687/988] Compiling ../extensions/cando/src/chem/properTorsion.cc [688/988] Compiling ../extensions/cando/src/chem/improperTorsion.cc [689/988] Compiling ../extensions/cando/src/chem/monomerCoordinates.cc [690/988] Compiling ../extensions/cando/src/chem/minimizer.cc [691/988] Compiling ../extensions/cando/src/chem/topology.cc [692/988] Compiling ../extensions/cando/src/chem/constitution.cc [693/988] Compiling ../extensions/cando/src/chem/entity.cc [694/988] Compiling ../extensions/cando/src/chem/candoDatabase.cc [695/988] Compiling ../extensions/cando/src/chem/rotamer.cc [696/988] Compiling ../extensions/cando/src/chem/atomReference.cc [697/988] Compiling ../extensions/cando/src/chem/frameRecognizer.cc [698/988] Compiling ../extensions/cando/src/chem/constitutionAtoms.cc [699/988] Compiling ../extensions/cando/src/chem/pdbMonomer.cc [700/988] Compiling ../extensions/cando/src/chem/stereoisomerAtoms.cc [701/988] Compiling ../extensions/cando/src/chem/loop.cc [702/988] Compiling ../extensions/cando/src/chem/indirectAtomCoordinateReference.cc [703/988] Compiling ../extensions/cando/src/chem/trajectory.cc [704/988] Compiling ../extensions/cando/src/chem/energyComponent.cc [705/988] Compiling ../extensions/cando/src/chem/maxcliqueseq.cc [706/988] Compiling ../extensions/cando/src/chem/energySketchStretch.cc [707/988] Compiling ../extensions/cando/src/chem/energyStretch.cc [708/988] Compiling ../extensions/cando/src/chem/energyAngle.cc [709/988] Compiling ../extensions/cando/src/chem/energyNonbond.cc [710/988] Compiling ../extensions/cando/src/chem/energyPeriodicBoundaryConditionsNonbond.cc [711/988] Compiling ../extensions/cando/src/chem/energyAnchorRestraint.cc [712/988] Compiling ../extensions/cando/src/chem/energyChiralRestraint.cc [713/988] Compiling ../extensions/cando/src/chem/energyDihedral.cc ../extensions/cando/src/chem/energyDihedral.cc:512:28: warning: loop not vectorized: the optimizer was unable to perform the requested transformation; the transformation might be disabled or specified as part of an unsupported transformation ordering [-Wpass-failed=transform-warning] num_real EnergyDihedral_O::evaluateAllComponentSingle( ^ ../extensions/cando/src/chem/energyDihedral.cc:512:28: note: could not determine the original source location for /usr/local/Cellar/cando/2.4.0-44-gc2df118a2-ga13423cc/share/clasp/extensions/cando/src/chem/energyDihedral.cc:581:3 1 warning generated. [714/988] Compiling ../extensions/cando/src/chem/energyPointToLineRestraint.cc [715/988] Compiling ../extensions/cando/src/chem/energyOutOfZPlane.cc [716/988] Compiling ../extensions/cando/src/chem/energyFixedNonbond.cc [717/988] Compiling ../extensions/seqan-clasp/src/seqan.cc [718/988] Compiling ../extensions/cando/src/chem/energyDihedralRestraint.cc [719/988] Compiling ../extensions/cando/src/chem/energyRigidBodyStaple.cc [720/988] Compiling ../extensions/cando/src/chem/energyAtomTable.cc [721/988] Compiling ../extensions/cando/src/chem/energyRigidBodyNonbond.cc [722/988] Compiling ../extensions/cando/src/chem/scoringFunction.cc [723/988] Compiling ../extensions/cando/src/chem/energySketchNonbond.cc [724/988] Compiling ../extensions/cando/src/chem/sketchFunction.cc [725/988] Compilin
test-bot (macos-13)
Process completed with exit code 1.
`brew install --verbose --build-bottle clasp-developers/clasp/cando` failed on macOS Monterey (12)!: Formula/cando.rb#L34
[674/988] Compiling ../extensions/cando/src/chem/cluster.cc [675/988] Compiling ../extensions/cando/src/chem/chemPackage.cc [676/988] Compiling ../extensions/cando/src/chem/matter.cc [677/988] Compiling ../extensions/cando/src/chem/aggregate.cc [678/988] Compiling ../extensions/cando/src/chem/molecule.cc [679/988] Compiling ../extensions/cando/src/chem/residue.cc [680/988] Compiling ../extensions/cando/src/chem/atom.cc [681/988] Compiling ../extensions/cando/src/chem/bond.cc [682/988] Compiling ../extensions/cando/src/chem/atomIdMap.cc [683/988] Compiling ../extensions/cando/src/chem/atomId.cc [684/988] Compiling ../extensions/cando/src/chem/elements.cc [685/988] Compiling ../extensions/cando/src/chem/restraint.cc [686/988] Compiling ../extensions/cando/src/chem/angle.cc [687/988] Compiling ../extensions/cando/src/chem/properTorsion.cc [688/988] Compiling ../extensions/cando/src/chem/improperTorsion.cc [689/988] Compiling ../extensions/cando/src/chem/monomerCoordinates.cc [690/988] Compiling ../extensions/cando/src/chem/minimizer.cc [691/988] Compiling ../extensions/cando/src/chem/topology.cc [692/988] Compiling ../extensions/cando/src/chem/constitution.cc [693/988] Compiling ../extensions/cando/src/chem/entity.cc [694/988] Compiling ../extensions/cando/src/chem/candoDatabase.cc [695/988] Compiling ../extensions/cando/src/chem/rotamer.cc [696/988] Compiling ../extensions/cando/src/chem/atomReference.cc [697/988] Compiling ../extensions/cando/src/chem/frameRecognizer.cc [698/988] Compiling ../extensions/cando/src/chem/constitutionAtoms.cc [699/988] Compiling ../extensions/cando/src/chem/pdbMonomer.cc [700/988] Compiling ../extensions/cando/src/chem/stereoisomerAtoms.cc [701/988] Compiling ../extensions/cando/src/chem/loop.cc [702/988] Compiling ../extensions/cando/src/chem/trajectory.cc [703/988] Compiling ../extensions/cando/src/chem/indirectAtomCoordinateReference.cc [704/988] Compiling ../extensions/cando/src/chem/energyComponent.cc [705/988] Compiling ../extensions/cando/src/chem/maxcliqueseq.cc [706/988] Compiling ../extensions/cando/src/chem/energySketchStretch.cc [707/988] Compiling ../extensions/cando/src/chem/energyStretch.cc [708/988] Compiling ../extensions/cando/src/chem/energyAngle.cc [709/988] Compiling ../extensions/cando/src/chem/energyNonbond.cc [710/988] Compiling ../extensions/cando/src/chem/energyPeriodicBoundaryConditionsNonbond.cc [711/988] Compiling ../extensions/cando/src/chem/energyAnchorRestraint.cc [712/988] Compiling ../extensions/cando/src/chem/energyChiralRestraint.cc [713/988] Compiling ../extensions/cando/src/chem/energyDihedral.cc ../extensions/cando/src/chem/energyDihedral.cc:512:28: warning: loop not vectorized: the optimizer was unable to perform the requested transformation; the transformation might be disabled or specified as part of an unsupported transformation ordering [-Wpass-failed=transform-warning] num_real EnergyDihedral_O::evaluateAllComponentSingle( ^ ../extensions/cando/src/chem/energyDihedral.cc:512:28: note: could not determine the original source location for /usr/local/Cellar/cando/2.4.0-44-gc2df118a2-ga13423cc/share/clasp/extensions/cando/src/chem/energyDihedral.cc:581:3 1 warning generated. [714/988] Compiling ../extensions/cando/src/chem/energyPointToLineRestraint.cc [715/988] Compiling ../extensions/cando/src/chem/energyOutOfZPlane.cc [716/988] Compiling ../extensions/cando/src/chem/energyFixedNonbond.cc [717/988] Compiling ../extensions/seqan-clasp/src/seqan.cc [718/988] Compiling ../extensions/cando/src/chem/energyDihedralRestraint.cc [719/988] Compiling ../extensions/cando/src/chem/energyAtomTable.cc [720/988] Compiling ../extensions/cando/src/chem/energyRigidBodyStaple.cc [721/988] Compiling ../extensions/cando/src/chem/energyRigidBodyNonbond.cc [722/988] Compiling ../extensions/cando/src/chem/scoringFunction.cc [723/988] Compiling ../extensions/cando/src/chem/energySketchNonbond.cc [724/988] Compiling ../extensions/cando/src/chem/plug.cc [725/988] Compiling ../exten
test-bot (macos-12)
Process completed with exit code 1.
test-bot (macos-13)
No files were found with the provided path: *.bottle.*. No artifacts will be uploaded.
test-bot (macos-12)
No files were found with the provided path: *.bottle.*. No artifacts will be uploaded.