COVID_analysis

Collated scripts and data for Clatworthy Lab's contributions towards scRNAseq analyses for SARS-CoV-2 infection (COVID-19).

Projects

COVIDPBMC - collaborative scRNAseq project between Ncl, Sanger/UCL and UCAM. Our lab was in charge of the B cell analysis. The BCR airr files are available in this repository: scbcr_airr.tsv.bz2
COVID_collab_Liu2021_Cell - scBCRseq analysis for Dr. John Tsang's team at NIH (https://linkinghub.elsevier.com/retrieve/pii/S0092867421001689).
COVID_NALT - Clatworthy lab scRNAseq project using paired NALT and blood samples over the COVID-19 disease course as a natural experiment into the effects of a viral stimulus on mucosal surface and secondary lymphoid responses.

Name		Name	Last commit message	Last commit date
Latest commit History 27 Commits
COVIDPBMC @ 9f51fe9		COVIDPBMC @ 9f51fe9
COVID_collab_Liu2021_Cell @ 83ff19f		COVID_collab_Liu2021_Cell @ 83ff19f
.gitattributes		.gitattributes
.gitignore		.gitignore
.gitmodules		.gitmodules
README.md		README.md
scbcr_airr.tsv.bz2		scbcr_airr.tsv.bz2