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docker_action:0.0

docker_action:0.0 #90

Workflow file for this run

# This is a basic workflow to help you get started with Actions
name: docker_action:0.0
on:
push:
branches:
- 'master'
workflow_dispatch:
schedule:
# * is a special character in YAML so you have to quote this string : weekly,Sunday,11:00 #m h d/m m d/w
- cron: '00 12 * * 0'
jobs:
docker-run-action:
runs-on: ubuntu-latest
container:
image: tamboraorg/crecoding:2020.0
env:
NODE_ENV: development
ports:
- 80
volumes:
- ${{ github.workspace }}:/cre/R
steps:
- uses: actions/checkout@v3
- name: Set ownership
run: |
# this is to fix GIT not liking owner of the checkout dir
chown -R $(id -u):$(id -g) $PWD
# with:
# ref: master
## - name: Install liblapack-dev gfortran
## run: (apt-get -y --no-install-recommends install liblapack-dev gfortran)
## - name: Install RcppArmadillo
## run: (R -e "install.packages('RcppArmadillo')")
## - name: Install Lmoments
## run: (R -e "install.packages('Lmoments')")
## - name: Install lmomco
## run: (R -e "install.packages('lmomco')")
- name: Install qdapTools
run: (R -e "install.packages('qdapTools')")
- name: Run knitr
run: (R -e "rmarkdown::render('/cre/R/README.Rmd')")
- name: Run knitr P/T
run: (R -e "rmarkdown::render('/cre/R/PI_and_TI.Rmd')")
- name: Run knitr P
run: (R -e "rmarkdown::render('/cre/R/PI_only.Rmd')")
- name: Submit changes
uses: EndBug/add-and-commit@v9